PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00201g00007.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family C2H2
Protein Properties Length: 473aa    MW: 52886 Da    PI: 7.931
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00201g00007.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.30.000127089221
                              EETTTTEEESSHHHHHHHHH CS
                   zf-C2H2  2 kCpdCgksFsrksnLkrHir 21
                              +C+ CgksF ++  L  H++
  Peaxi162Scf00201g00007.1 70 VCKECGKSFQSWKALFGHMK 89
                              6******************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5015710.2216996IPR007087Zinc finger, C2H2
SMARTSM003550.00786991IPR015880Zinc finger, C2H2-like
SuperFamilySSF576677.3E-97091No hitNo description
PfamPF139121.9E-87193IPR007087Zinc finger, C2H2
PROSITE patternPS0002807191IPR007087Zinc finger, C2H2
SuperFamilySSF576677.3E-9302329No hitNo description
PfamPF139121.0E-11307330IPR007087Zinc finger, C2H2
SMARTSM003550.063307329IPR015880Zinc finger, C2H2-like
PROSITE profilePS5015711.074307334IPR007087Zinc finger, C2H2
PROSITE patternPS000280309329IPR007087Zinc finger, C2H2
PfamPF139123.0E-10382405IPR007087Zinc finger, C2H2
SMARTSM003550.19382404IPR015880Zinc finger, C2H2-like
PROSITE profilePS501578.787382404IPR007087Zinc finger, C2H2
PROSITE patternPS000280384404IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 473 aa     Download sequence    Send to blast
MRSHMINSTD GRSSKKMLPS LISNGNLDKG TEAAGDQSGS INYVLRENPK KTSKFAESSE  60
DTLLPNQNKV CKECGKSFQS WKALFGHMKC HSERISSMNN NSVEEGSWNS ANHKQELMDS  120
QSDTEAAAPN KKKRSSRKMK RYMATNTTSS SLTFNASPCV SDIEHELQEE VAMSLILLSR  180
DVGSWVGQNH VTECSDNNYQ SQKVGIKSTK CKDVDLVNMK KVKIGKTEQG ESSKSNSKMF  240
GMSSNGQKRD NSDVPTDEKK KKIKVDNENR VVEESEVEFP NKLVKGSGLV MSNMSYDLKE  300
NSSKMNFECT TCNKSFHSYQ ALGGHRASHK NNKGENSNID IEHLQNQDTD HVKNCSNESA  360
INELGEKNIE TNSGSKKLSK MHECPICFKI FPSGQALGGH KRSHLIAEAK RNNNQAVEIQ  420
KPIPEIRNFL DLNLPAPVEE ENMLDSSSEH VGFQQWWMEN SHKHEQLLGL LSN
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009623743.10.0PREDICTED: zinc finger protein ZAT9-like
RefseqXP_016438592.10.0PREDICTED: zinc finger protein ZAT9-like
TrEMBLA0A1S3XFD40.0A0A1S3XFD4_TOBAC; zinc finger protein ZAT9-like
STRINGXP_009623743.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA44812241
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45120.11e-27C2H2-like zinc finger protein