PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Peaxi162Scf00185g01625.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
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Family | G2-like | ||||||||
Protein Properties | Length: 272aa MW: 30599.5 Da PI: 7.8397 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 103.9 | 9.8e-33 | 31 | 85 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprlrWt +LHe+Fveav++LGG++kAtPk++l+lm++kgLtl+h+kSHLQkYRl Peaxi162Scf00185g01625.1 31 KPRLRWTADLHEHFVEAVTKLGGPDKATPKSVLRLMGLKGLTLYHLKSHLQKYRL 85 79****************************************************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51294 | 11.983 | 28 | 88 | IPR017930 | Myb domain |
Gene3D | G3DSA:1.10.10.60 | 1.5E-31 | 28 | 86 | IPR009057 | Homeodomain-like |
SuperFamily | SSF46689 | 3.05E-16 | 31 | 88 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 7.9E-24 | 31 | 86 | IPR006447 | Myb domain, plants |
Pfam | PF00249 | 1.3E-8 | 33 | 84 | IPR001005 | SANT/Myb domain |
Pfam | PF14379 | 1.2E-21 | 131 | 176 | IPR025756 | MYB-CC type transcription factor, LHEQLE-containing domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 272 aa Download sequence Send to blast |
MYNASELGGG SGFMYENGNG EGGIVMTRDP KPRLRWTADL HEHFVEAVTK LGGPDKATPK 60 SVLRLMGLKG LTLYHLKSHL QKYRLGQQAK KQNAADHNKE NSGDSSGHFS LHSRGPSTSS 120 LSMNYMQGEV PISEAVMCQI EVQKRLQEQL EVQQKLQMRI EAQGKYLQAM LEKAQKNLPV 180 SMNSPSALEA TRAQQFNLPL SNITDHLHGD NRDDTIMGKR IYDNTMDELP RSDYFKEEDQ 240 KRDMNLKLKE ASITFDLNSR SSYDFFGANT AV |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
6j4k_A | 1e-19 | 31 | 84 | 2 | 55 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4k_B | 1e-19 | 31 | 84 | 2 | 55 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_A | 1e-19 | 31 | 84 | 1 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_B | 1e-19 | 31 | 84 | 1 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_C | 1e-19 | 31 | 84 | 1 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_D | 1e-19 | 31 | 84 | 1 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_A | 1e-19 | 31 | 84 | 2 | 55 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_C | 1e-19 | 31 | 84 | 2 | 55 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_D | 1e-19 | 31 | 84 | 2 | 55 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_F | 1e-19 | 31 | 84 | 2 | 55 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_H | 1e-19 | 31 | 84 | 2 | 55 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_J | 1e-19 | 31 | 84 | 2 | 55 | Protein PHOSPHATE STARVATION RESPONSE 1 |
Search in ModeBase |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_019247845.1 | 1e-144 | PREDICTED: myb family transcription factor PHL11 isoform X1 | ||||
Swissprot | C0SVS4 | 8e-75 | PHLB_ARATH; Myb family transcription factor PHL11 | ||||
TrEMBL | A0A1J6ID59 | 1e-143 | A0A1J6ID59_NICAT; Myb family transcription factor phl11 | ||||
STRING | XP_009769428.1 | 1e-133 | (Nicotiana sylvestris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA4416 | 21 | 39 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G45580.1 | 1e-62 | G2-like family protein |
Publications ? help Back to Top | |||
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