PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Regulation |

Orthologous Group |

Basic Information? help Back to Top

TF ID

Peaxi162Scf00175g00047.1

Organism

Petunia axillaris

Taxonomic ID

33119

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia

Family

HRT-like

Protein Properties

Length: 500aa MW: 55772.8 Da PI: 10.0945

Description

HRT-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peaxi162Scf00175g00047.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HRT-like	50.1	4.7e-16	254	284	1	31
HRT-like 1 iCGviledGsvCkrqPvkgRKRCeeHKGmRi 31 iCGv+l++GsvC r+P+ g+KRC eHKGm++ Peaxi162Scf00175g00047.1 254 ICGVALGHGSVCIRPPIMGNKRCVEHKGMKV 284 8****************************97 PP
2	HRT-like	50.8	2.8e-16	317	347	1	31
HRT-like 1 iCGviledGsvCkrqPvkgRKRCeeHKGmRi 31 iCG+il+ G +C r+P kg+KRC eHKG+Ri Peaxi162Scf00175g00047.1 317 ICGFILDSGAPCARKPFKGNKRCLEHKGRRI 347 8*****************************7 PP
3	HRT-like	50.2	4.4e-16	399	429	1	31
HRT-like 1 iCGviledGsvCkrqPvkgRKRCeeHKGmRi 31 iCGv+l+ G C+rqP gRKRCeeHKGmR+ Peaxi162Scf00175g00047.1 399 ICGVHLNGGALCTRQPEVGRKRCEEHKGMRV 429 8*****************************7 PP
4	HRT-like	43.1	7.1e-14	470	499	1	30
HRT-like 1 iCGviledGsvCkrqPvkgRKRCeeHKGmR 30 +CG +l++Gs+C+r+P g+KRC++HKGm+ Peaxi162Scf00175g00047.1 470 TCGSTLRNGSCCRRKPSGGNKRCWQHKGMK 499 7****************************8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
CDD	cd00719	0.00191	84	154	No hit	No description

Sequence ? help Back to Top
Protein Sequence Length: 500 aa Download sequence Send to blast
MGAKDGGISV RLKREECKRT KHDSAFCEWK ILIGANDWEE YLAGKEGAEK YRTQNLPNCA 60 SCPGVYELGI AISRREASRL DSDYIIPVYV GKSDNVRTRL QRYGREGAHL ENGQEKAGLF 120 KEAFSRGLSI VYRWAPTSHN KAAEETEAQL LDKFDYAWNK GSNGVRRQDD VLRKLDGISR 180 ATRLPAFIRK LQLSLEKQKG IKIKACEPLL LENGSDFHDR FERTSFFPRI FKLGRSRPRL 240 VSLSYGVNGG PHTICGVALG HGSVCIRPPI MGNKRCVEHK GMKVNCVNSK LKAEGTSFVI 300 NESTRPCASR DEEKAPICGF ILDSGAPCAR KPFKGNKRCL EHKGRRIRAF IPQPVTDKDG 360 LEYRTYTSND CQQMLSNRAG LQHPQDFSSS LILKNHDIIC GVHLNGGALC TRQPEVGRKR 420 CEEHKGMRVK EPIPKQLGAE VPGVLASPTA TRSGKKHWNI DSPSVNHSPT CGSTLRNGSC 480 CRRKPSGGNK RCWQHKGMKS

Sequence ? help Back to Top

Protein Sequence Length: 500 aa Download sequence Send to blast

MGAKDGGISV RLKREECKRT KHDSAFCEWK ILIGANDWEE YLAGKEGAEK YRTQNLPNCA  60
SCPGVYELGI AISRREASRL DSDYIIPVYV GKSDNVRTRL QRYGREGAHL ENGQEKAGLF  120
KEAFSRGLSI VYRWAPTSHN KAAEETEAQL LDKFDYAWNK GSNGVRRQDD VLRKLDGISR  180
ATRLPAFIRK LQLSLEKQKG IKIKACEPLL LENGSDFHDR FERTSFFPRI FKLGRSRPRL  240
VSLSYGVNGG PHTICGVALG HGSVCIRPPI MGNKRCVEHK GMKVNCVNSK LKAEGTSFVI  300
NESTRPCASR DEEKAPICGF ILDSGAPCAR KPFKGNKRCL EHKGRRIRAF IPQPVTDKDG  360
LEYRTYTSND CQQMLSNRAG LQHPQDFSSS LILKNHDIIC GVHLNGGALC TRQPEVGRKR  420
CEEHKGMRVK EPIPKQLGAE VPGVLASPTA TRSGKKHWNI DSPSVNHSPT CGSTLRNGSC  480
CRRKPSGGNK RCWQHKGMKS

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_016580607.1	0.0	PREDICTED: protein EFFECTOR OF TRANSCRIPTION 2-like
TrEMBL	A0A1U8HAY8	0.0	A0A1U8HAY8_CAPAN; protein EFFECTOR OF TRANSCRIPTION 2-like
STRING	XP_009779864.1	0.0	(Nicotiana sylvestris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA7741	23	30

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G56780.1	1e-18	effector of transcription2