PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00170g01227.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family FAR1
Protein Properties Length: 2205aa    MW: 245360 Da    PI: 8.437
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00170g01227.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR1263e-0816911767389
                      FAR1    3 YneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleH 85  
                                Yn+YA   GF +rk +++++++++      f    +g++          ++  +e r+gCka++k k   ++ wev ++  eH
  Peaxi162Scf00170g01227.1 1691 YNSYAVAKGFGIRKGAKTYNRNTE------FFVLVKGNPLCVPII---GKQYVKEYRCGCKARIKFKIL-NEIWEVFEFCDEH 1763
                                ****************99995555......777778888887766...7889999************99.9************ PP

                      FAR1   86 nHel 89  
                                nH++
  Peaxi162Scf00170g01227.1 1764 NHPM 1767
                                **98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.40.70.109.0E-4531222IPR021109Aspartic peptidase domain
SuperFamilySSF506303.03E-7437423IPR021109Aspartic peptidase domain
PROSITE profilePS5176719.82344416IPR033121Peptidase family A1 domain
PfamPF145434.6E-3844222IPR032861Xylanase inhibitor, N-terminal
CDDcd054891.78E-12049419No hitNo description
Gene3DG3DSA:2.40.70.106.0E-51232427IPR021109Aspartic peptidase domain
PfamPF145411.4E-52257416IPR032799Xylanase inhibitor, C-terminal
Gene3DG3DSA:2.40.70.107.3E-35464637IPR021109Aspartic peptidase domain
SuperFamilySSF506302.12E-62470840IPR021109Aspartic peptidase domain
PROSITE profilePS5176714.169477832IPR033121Peptidase family A1 domain
PfamPF145434.7E-25477637IPR032861Xylanase inhibitor, N-terminal
Gene3DG3DSA:2.40.70.102.2E-48647842IPR021109Aspartic peptidase domain
PfamPF145412.3E-48673832IPR032799Xylanase inhibitor, C-terminal
Gene3DG3DSA:2.40.70.101.0E-438741062IPR021109Aspartic peptidase domain
SuperFamilySSF506301.78E-718801263IPR021109Aspartic peptidase domain
PROSITE profilePS5176718.3918871257IPR033121Peptidase family A1 domain
PfamPF145431.6E-358871063IPR032861Xylanase inhibitor, N-terminal
CDDcd054895.33E-1158921260No hitNo description
Gene3DG3DSA:2.40.70.107.4E-4710731265IPR021109Aspartic peptidase domain
PfamPF145414.9E-4910981257IPR032799Xylanase inhibitor, C-terminal
Gene3DG3DSA:2.40.70.109.9E-4412771464IPR021109Aspartic peptidase domain
SuperFamilySSF506302.06E-6512831651IPR021109Aspartic peptidase domain
PROSITE profilePS5176714.4212901663IPR033121Peptidase family A1 domain
PfamPF145434.8E-3812901465IPR032861Xylanase inhibitor, N-terminal
Gene3DG3DSA:2.40.70.104.3E-3714751651IPR021109Aspartic peptidase domain
PfamPF145412.4E-4215001651IPR032799Xylanase inhibitor, C-terminal
PfamPF031012.9E-516911767IPR004330FAR1 DNA binding domain
Gene3DG3DSA:2.40.70.105.0E-4418011989IPR021109Aspartic peptidase domain
SuperFamilySSF506305.85E-7618072196IPR021109Aspartic peptidase domain
PROSITE profilePS5176719.28618142189IPR033121Peptidase family A1 domain
PfamPF145433.0E-3718141990IPR032861Xylanase inhibitor, N-terminal
CDDcd054891.88E-11718192192No hitNo description
Gene3DG3DSA:2.40.70.101.3E-4920002200IPR021109Aspartic peptidase domain
PfamPF145411.2E-4920252189IPR032799Xylanase inhibitor, C-terminal
Sequence ? help Back to Top
Protein Sequence    Length: 2205 aa     Download sequence    Send to blast
MSSCSYYFFH FFFLLISSTC LAQTTFHPKT LFLAVKKDPS TLQYITEIHQ RTPLVPVKLA  60
VHLGSENVWV DCETGFKSST YKPARCNSKQ CTLGRTTACG DCLTENKTRP GCNNDACYNI  120
VSNPAMETFF SGGEIAEDVL SIQSVNGSTA GPVVTVPKFI FSCSPSYLTE KLGKDVKGMV  180
GFGQQSPVSL ATQLASAFRF GRKFAICLSP STTQNGVIFI GDSPYLFALG FDASQNLIYT  240
PIITYPNFFI TNRASPEYYI QVSSIRISGK TVPLNRTLLS FDENEDGGTR VSTAVPYTVL  300
EASVYNAVSK AFINEMPKDV KTVPAVKPFK TCFDSSFIGM SRLGYNAPQI ELVLHKPNVY  360
WTITGANSLV KVSESVVCLA FVERQQTWGQ AIVIGGYQMQ DNLVEFDLAR KRVGFSNSLF  420
FRQTMCSNHF YSSTVGESYS FFHFFFLLTI STCLAQTTFH PKTLFLAVKK DPSTQLYITE  480
IHQRTPLVPL KLAVHLGGES LWMDCNQGYK SSTYRPARCN SRQCNLGRST ACGDCLPDIT  540
KTRPGCNNDA CYSIVLKPAT DTNLFDRGEI AEDVLSIQSV NGSTAGPVVT VPKFIFGCAP  600
TYLAQGLGKG VKGLVGFGQQ SPASFGAQFA PSFRFSRQPY LFALGFDASQ DLIYTPIITQ  660
LNYFGIPNRG SPEYYIQVSS IRINGKIVPL NTTLLWTDEL NQAGTRITTF VPYTVLEPSI  720
YNVVSKAFIN EMPKDVKTVP AVKPFKTCFD SSFIGMSRLG YNAPQIDLVL HKPNVYWTIT  780
GANSLIKVSE TVVCLAFVER SETWGQAIII GGYQMQDNLV EFDLSRKRIG FSNSLLFRQT  840
MCTNQFYAYY FFHFFFLLII STCLAQTTFH PKTLFLAVKK DPSTLQYITE IHQRTPLVPV  900
KLAVHLGSEN VWVDCETGFK SSTYKPARCN SKQCALGRTT ACGDCLTENK TRPGCNNDAC  960
YNIVSNPAME TFFSGGEIAE DVLSIKSING STTGPIVTVQ KFIFSCSPSF LTENLGKDVK  1020
GMVGFGQQSP VSLATQLASA FRFSRQFAIC LSPEQNGIIF IGHRPYLFAL GFDASQNLIY  1080
TPIITYPNFF ITNRASPEYY IQVSSIKISG KTVPLNRTLL SFYDNDNGGT RISTAIPYTE  1140
LETSIYKVVS KAFINAMPKD VKAVSPVKPF QTCFNSSFIG MSRLGYNAPQ IDLVLHKPNV  1200
YWTITGANSL VKVSETVVCL AFVERRQTFG QAIVIGGFQM HDNLVEFDLS RRRIGFSNSL  1260
FFRQTIIAKT TFQPKTLFLT VKQDPDTLQY ITEIRQGTPL VPVKLAVHLG GESLWVDCEN  1320
GYNSSTYNPA RCHSRQCDLA RSVDCGDCWH DPVPGCNNNA CYNEIENPIM DDGMIGEVAE  1380
DVLSIRSING YIPGHVATVP RFIFSCAPSY YTQKLGNNVK GMVGFGQQSP ISLAAQFASN  1440
FRFSRKFAIC LSSSTERSGV IFIGHSPYFF SLAFDASRDL IYTPILAYPS PIYPNRSSSA  1500
YYIQVSSIRI NGKTLPLNET LLSLDANLDG GTRISTAAPY TVLEPSIYSV VSKAFVEEMP  1560
KEVEKVSPVQ PFKTCFNSTN IGMSRLGYNA PEINIVLHKP NVYWTIIGAN SLVKVSDDVT  1620
CLAFVERPLT WRNFLGQSIV IGGYQMQDNL IITLMIKIVL NWCIQCLNTN NGFDFKIGMK  1680
FNSEDESYAA YNSYAVAKGF GIRKGAKTYN RNTEFFVLVK GNPLCVPIIG KQYVKEYRCG  1740
CKARIKFKIL NEIWEVFEFC DEHNHPMLIP MSSLSYYLFH FSFLLIISTC IAITTFQPKT  1800
LFLAVKKDPS TLQYITKIHQ RTPLVPLKFA VHLGGESLWV DCEERYNSST YSPAPCHSRQ  1860
CDLARATDCG DCYQDPRLGC NENACYNDIE NPVNEANGLI GRVVEDVLSI QSINGSIPGP  1920
VATVPRFIFS CSPSFLSQNL GKNVKGMVGF GQQSPVSFAT QLASTFRFSR KFAICLSSST  1980
KRNGVIFIGH SPYFFSLAFD ASRNLIYTPM LAYPRLIYPN RPQTEYYIQV SSIRVNGKTL  2040
PINKTLLSVD ENNDGGTRIS TDVPYTVLEH SIYSVLSKAF VNEMPKEVKT VPPVQPFKTC  2100
FDSTYIGMSR LGYNAPEINF VLHKPNVYWT IIGANSLIKV SDGVICLAFV ERRREPWRKA  2160
LGQSIVIGGY QMQDNIVEFD LSRKRIGFSN SLFFQQTMCS NHNYA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3vlb_A1e-1192322041413EDGP
3vlb_C1e-1192322041413EDGP
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015084670.10.0basic 7S globulin-like
TrEMBLA0A3Q7HTR00.0A0A3Q7HTR0_SOLLC; Uncharacterized protein
STRINGSolyc08g076620.1.10.0(Solanum lycopersicum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80010.14e-08FAR1-related sequence 8