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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Peaxi162Scf00167g00084.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
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Family |
ERF |
Protein Properties |
Length: 289aa MW: 32891.9 Da PI: 5.3337 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Peaxi162Scf00167g00084.1 | genome | SGN | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 59.1 | 1e-18 | 133 | 183 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
+y+GVr+++ +g+++AeIrdp+ +r++lg+f ta eAa a+++a+ +l+g
Peaxi162Scf00167g00084.1 133 RYRGVRQRP-WGKFAAEIRDPTRK--GARVWLGTFETAIEAAMAYDRAAFRLRG 183
8********.**********8542..4*************************98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 289 aa
Download sequence Send
to blast |
MDFSTQKSST LDMIRQHLLD DVVFMEHYCS SSETSSTLYS QNSSTSESLE SFTSDLKTEN 60 SFTFDQQPFE FDCFEFETKP MISPPTISNS PKKTSFNERK PSLNIAIPKK TESKTEQPKT 120 GEPKTEDSVL KKRYRGVRQR PWGKFAAEIR DPTRKGARVW LGTFETAIEA AMAYDRAAFR 180 LRGSKAILNF PLEVSNFKQE DEIVDNKREQ IVNLNSCGKR ERQAENEDEV VIKKEVKREV 240 IETKIDTPLT PSSWSSIWDC GDGKGIFEVP PLSPLSPYSS FGYSQLLVS
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Functional Description ? help
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Source |
Description |
UniProt | Acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. Involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways mediated by ethylene, that seems to depend on a protein kinase/phosphatase cascade, and to be influenced by methyl-jasmonate. {ECO:0000269|PubMed:10652129, ECO:0000269|PubMed:10792818, ECO:0000269|PubMed:7756828, ECO:0000269|Ref.2}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Strongly induced by ethephon (ethylene-releasing compound) in buds and in leaves. Also strongly induced by cycloheximide, mechanical stimuli. Wounding leads to a both local and systemic expression, independently of ethylene, and through a de-novo-protein-synthesis-independent regulation. Wound induction is reduced by methyl-jasmonate. Induction by purified xylanase from Trichoderma viride (TvX) and another elicitor from Phytophthora infestans (PiE), that appears to be mediated by a protein kinase cascade, and to be negatively regulated by protein phosphatases. {ECO:0000269|PubMed:10652129, ECO:0000269|PubMed:12090623, ECO:0000269|PubMed:7756828, ECO:0000269|Ref.2}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | HQ259606 | 0.0 | HQ259606.1 Petunia x hybrida ethylene-responsive-element-binding factor 12 mRNA, complete cds. |