PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00165g00815.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family WRKY
Protein Properties Length: 285aa    MW: 31893.3 Da    PI: 4.7529
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00165g00815.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY102.42.6e-32121177258
                               --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS CS
                      WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnh 58 
                               dDgy+WrKYGqK++k+s++prsYY+Ct ++C +kk+vers++dp++++itYeg H h
  Peaxi162Scf00165g00815.1 121 DDGYKWRKYGQKSIKNSPYPRSYYKCTNPRCGAKKQVERSSDDPDTFIITYEGLHLH 177
                               8******************************************************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.3E-30109177IPR003657WRKY domain
PROSITE profilePS5081128.208115180IPR003657WRKY domain
SuperFamilySSF1182901.31E-27116177IPR003657WRKY domain
SMARTSM007741.3E-36120179IPR003657WRKY domain
PfamPF031062.8E-26121177IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 285 aa     Download sequence    Send to blast
MLMHEKEFKS SWSYEDELIQ ELLDNESPIF LAPQDSTSTS CPSSSDNLLA TMSFISAVSS  60
GANIDDIESG LSMTSYGIQP HDVSSDRRLG LERGLNLMMS KQEDHDAKYT LRIKTGNAIA  120
DDGYKWRKYG QKSIKNSPYP RSYYKCTNPR CGAKKQVERS SDDPDTFIIT YEGLHLHFAY  180
PFLALDPPQF VDQPNKKPKL TNSKAQNWES ENASEVDESP KCDNTSLAGD FEQELGFERM  240
GSHGLLEDMV PLLVRNPSMK PTSSYSSSSS YSSPPTSPSF SWSNN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A4e-221191771674Probable WRKY transcription factor 4
2lex_A4e-221191771674Probable WRKY transcription factor 4
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9754483e-67HG975448.1 Solanum pennellii chromosome ch09, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009764599.11e-148PREDICTED: probable WRKY transcription factor 49
RefseqXP_016450821.11e-148PREDICTED: probable WRKY transcription factor 49
TrEMBLA0A1S3YF121e-147A0A1S3YF12_TOBAC; probable WRKY transcription factor 49
TrEMBLA0A1U7VQG91e-147A0A1U7VQG9_NICSY; probable WRKY transcription factor 49
STRINGXP_009764599.11e-148(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA120752124
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43290.12e-46WRKY DNA-binding protein 49