![PlantTFDB](images/title_pic.jpg) |
Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Peaxi162Scf00159g00167.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
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Family |
GRAS |
Protein Properties |
Length: 579aa MW: 63354.2 Da PI: 4.8335 |
Description |
GRAS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Peaxi162Scf00159g00167.1 | genome | SGN | View CDS |
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Signature Domain? help Back to Top |
![Signature Domain](draw_signature_domain.php?sp=Pax&pid=Peaxi162Scf00159g00167.1) |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GRAS | 445.4 | 3.8e-136 | 199 | 576 | 1 | 374 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfs 85
lv++L++cAea+++++++la+alL+++ la +++ +m+++a+yf+eALa++++r l p++ ++ s+ + + f+
Peaxi162Scf00159g00167.1 199 LVHTLMACAEAIQQDNFKLAEALLKQIGFLAVSQAGAMRKVATYFAEALARKIYR--------LYPTNPND--SAFTDLLQMHFY 273
689****************************************************........44555543..4444444446** PP
GRAS 86 evsPilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAe 170
e++P+lkf+h+taNqaIlea+ g+++vH+iDf+++qG+QWpaLlqaLa Rp+g+p++R+Tg+g+p++++++ l+e+g++La++A+
Peaxi162Scf00159g00167.1 274 ETCPYLKFAHFTANQAILEAFTGKSKVHVIDFSMKQGMQWPALLQALALRPAGAPTFRLTGIGPPAHDNTDHLQEVGWKLAQLAD 358
************************************************************************************* PP
GRAS 171 elgvpfefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFle 255
+++v+fef+ +va++++dl+ ++++++gE++aVn++++lh ll++++ +e+ vL++vk+++P++++vveqea+hn++ F +
Peaxi162Scf00159g00167.1 359 SINVEFEFRGFVANSIADLNAAMFDIREGETVAVNSIFELHPLLARPGGVEK----VLSFVKDMKPEIFTVVEQEANHNGPGFID 439
***************************************************9....***************************** PP
GRAS 256 rflealeyysalfdsleak.................lpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaG 323
rf+e+l+yys+lfdsle l++ s++++++++++lgr+i nvvaceg +r+erhetl++Wr r+++ G
Peaxi162Scf00159g00167.1 440 RFTESLHYYSTLFDSLEGCgvgggaggggaggvggeLGPVSDQDKMMSEVYLGRQILNVVACEGVDRVERHETLAQWRTRFNSGG 524
****************9888***************************************************************** PP
GRAS 324 Fkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374
F+pv+l+++a kqa++ll+ ++ + gyrvee++g+l+lgW++rpL+++SaW+
Peaxi162Scf00159g00167.1 525 FEPVHLGSNAFKQASMLLALFAgGGGYRVEENNGCLMLGWHTRPLIATSAWK 576
**********************9999*************************8 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006808 | Biological Process | regulation of nitrogen utilization |
GO:0009723 | Biological Process | response to ethylene |
GO:0009737 | Biological Process | response to abscisic acid |
GO:0009863 | Biological Process | salicylic acid mediated signaling pathway |
GO:0009867 | Biological Process | jasmonic acid mediated signaling pathway |
GO:0009938 | Biological Process | negative regulation of gibberellic acid mediated signaling pathway |
GO:0010187 | Biological Process | negative regulation of seed germination |
GO:0010218 | Biological Process | response to far red light |
GO:0010233 | Biological Process | phloem transport |
GO:0042176 | Biological Process | regulation of protein catabolic process |
GO:0042538 | Biological Process | hyperosmotic salinity response |
GO:2000033 | Biological Process | regulation of seed dormancy process |
GO:2000377 | Biological Process | regulation of reactive oxygen species metabolic process |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 579 aa
Download sequence Send
to blast |
MKRNQNQTTS YQQQEQETNN SSSSNTGKAK MWEQEQQDAG VDELLAVLGY KVKASDMAEV 60 ASKLEQLEQV MGSVQQDNLS FLASETVHYN PSDLSSWLES MISEFNPHDP FTPSTNHNDK 120 TNIVYDDSSF DSDLTAIPGK ALLSQIEPES KRFKMEISSS SSSLSVDSTM WGSAGTPLPE 180 STTTRPVVLV DSQDNGVRLV HTLMACAEAI QQDNFKLAEA LLKQIGFLAV SQAGAMRKVA 240 TYFAEALARK IYRLYPTNPN DSAFTDLLQM HFYETCPYLK FAHFTANQAI LEAFTGKSKV 300 HVIDFSMKQG MQWPALLQAL ALRPAGAPTF RLTGIGPPAH DNTDHLQEVG WKLAQLADSI 360 NVEFEFRGFV ANSIADLNAA MFDIREGETV AVNSIFELHP LLARPGGVEK VLSFVKDMKP 420 EIFTVVEQEA NHNGPGFIDR FTESLHYYST LFDSLEGCGV GGGAGGGGAG GVGGELGPVS 480 DQDKMMSEVY LGRQILNVVA CEGVDRVERH ETLAQWRTRF NSGGFEPVHL GSNAFKQASM 540 LLALFAGGGG YRVEENNGCL MLGWHTRPLI ATSAWKLSS
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Functional Description ? help
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Source |
Description |
UniProt | Probable transcriptional regulator that acts as a repressor of the gibberellin (GA) signaling pathway. Probably acts by participating in large multiprotein complexes that repress transcription of GA-inducible genes. Upon GA application, it is degraded by the proteasome, allowing the GA signaling pathway. |