PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Peaxi162Scf00158g00067.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
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Family | ERF | ||||||||
Protein Properties | Length: 113aa MW: 12793.5 Da PI: 7.3669 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 23.1 | 1.8e-07 | 12 | 49 | 11 | 55 |
AP2 11 krgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +rg+WvAe+ d r +f+taeeAa a+ + +++g Peaxi162Scf00158g00067.1 12 NRGKWVAEVGD-------IRCKTRTFDTAEEAALAYHKTVIEMRG 49 58******888.......555558************999888886 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00380 | 4.8E-8 | 4 | 63 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 10.573 | 4 | 57 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 1.47E-13 | 7 | 55 | No hit | No description |
SuperFamily | SSF54171 | 2.55E-8 | 7 | 56 | IPR016177 | DNA-binding domain |
Gene3D | G3DSA:3.30.730.10 | 1.3E-9 | 12 | 55 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 113 aa Download sequence Send to blast |
MQRSIEGLDM GNRGKWVAEV GDIRCKTRTF DTAEEAALAY HKTVIEMRGV DAVTNILKPP 60 TRDLPSREIN FINPSPRESS FISPQPREIN IIGPRPREIN FMELPSSPTN DTR |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009783397.1 | 2e-19 | PREDICTED: ethylene-responsive transcription factor ERF069-like | ||||
Refseq | XP_016494298.1 | 2e-19 | PREDICTED: ethylene-responsive transcription factor CRF3-like | ||||
Refseq | XP_019252225.1 | 2e-19 | PREDICTED: ethylene-responsive transcription factor CRF3-like | ||||
TrEMBL | A0A1J6JG45 | 5e-18 | A0A1J6JG45_NICAT; Ethylene-responsive transcription factor crf4 | ||||
TrEMBL | A0A1S4BZP8 | 4e-18 | A0A1S4BZP8_TOBAC; ethylene-responsive transcription factor CRF3-like | ||||
TrEMBL | A0A1U7WU03 | 6e-18 | A0A1U7WU03_NICSY; ethylene-responsive transcription factor ERF069-like | ||||
STRING | XP_009783397.1 | 9e-19 | (Nicotiana sylvestris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA21 | 24 | 1165 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G33710.1 | 2e-09 | ERF family protein |