PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00156g00023.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family bHLH
Protein Properties Length: 254aa    MW: 29777.1 Da    PI: 8.3777
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00156g00023.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH438.2e-1481133155
                               CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
                       HLH   1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                               +r ah e+Er+RR+++ +  + Lr++lP       ++K s ++ L++A +YI++L+
  Peaxi162Scf00156g00023.1  81 KRIAHREIERQRRQEMANLCASLRSHLPLeY---IKGKRSVSDHLQQALNYIQHLK 133
                               799**************************77...********************95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088813.79580132IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000104.4E-1181132IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474593.01E-1381147IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.105.7E-1081147IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000839.29E-1081134No hitNo description
SMARTSM003534.5E-486138IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 254 aa     Download sequence    Send to blast
MDSLWEIFSF HQIQDYDHHQ ELLQIPSSTT PCQLPQQELT NCETSLAKND TNKKKRSRRL  60
SSVPDTTNDG MNIRDQNKLI KRIAHREIER QRRQEMANLC ASLRSHLPLE YIKGKRSVSD  120
HLQQALNYIQ HLKNNMKELE KRRDKLKILD HYSGDFKVDH KYNLADYVKV NHCEDGVEIL  180
INDEFWKERL PLSRVLQELV KRKLNVVTCV STKVDETFIH KIHAEVTDVS CMDVSALAQK  240
LAEILNLPKE KLVQ
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18092KRIAHREIERQRR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016462318.11e-110PREDICTED: transcription factor bHLH118-like
TrEMBLA0A1S3ZD381e-109A0A1S3ZD38_TOBAC; transcription factor bHLH118-like
STRINGXP_009597785.11e-109(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA59824109
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51790.14e-37bHLH family protein