PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00152g00426.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family bHLH
Protein Properties Length: 372aa    MW: 41452.1 Da    PI: 5.0609
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00152g00426.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.12e-102973371055
                               HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                       HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                               r+RR++iN+++  L+ l+P+      +K++ +++Le+Av+Y+k Lq
  Peaxi162Scf00152g00426.1 297 RKRREKINERLRILQNLVPNG-----TKVDISTMLEEAVQYVKFLQ 337
                               9******************97.....8******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.154287336IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474593.01E-14289353IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.104.4E-13292351IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.9E-11293342IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.64E-11296341No hitNo description
PfamPF000101.1E-7297337IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 372 aa     Download sequence    Send to blast
METLGAFTTR ITENFDGEWS SFGGMCSTEE ADFMAQLFVN SSLPDEQPSH ESYINNMGGK  60
AEVFPECSSI DINSSSMSFL SQGRCYSGSG GIHFPPGYQE SYYTSYSQPM LMRNDSSITM  120
EHGMVDGEYV TISPSDQVHT NNIVHETSDF FNQDVSNDSI ESGENIHEAV LLGKGLQLGR  180
DYEMPELEQS RKNKVECQSE ISKKRSRLPG DVPKNKRSVK QKENPKTSED IDGKTNVLRR  240
QNSMMSCCSE NESNVSHELN GLTSSSNTKM RAGSLNSNGK ARASKGSASD PQSMYARKRR  300
EKINERLRIL QNLVPNGTKV DISTMLEEAV QYVKFLQLQI KLLSSDDHWM YAPIAYNGMD  360
IGLDLNIGIP KS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1296301RKRREK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009602073.11e-121PREDICTED: transcription factor bHLH139-like
TrEMBLA0A1S3X4Z41e-119A0A1S3X4Z4_TOBAC; transcription factor bHLH139-like
STRINGXP_009602073.11e-120(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA63922101
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G14760.12e-62bHLH family protein