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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Peaxi162Scf00152g00009.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
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Family |
ERF |
Protein Properties |
Length: 238aa MW: 26756 Da PI: 5.5066 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Peaxi162Scf00152g00009.1 | genome | SGN | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 62.9 | 6.9e-20 | 104 | 152 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
y+GVr+++ +g+W+AeIrdp+ + +r++lg+f tae+Aa+a+++a+ +++g
Peaxi162Scf00152g00009.1 104 YRGVRQRP-WGKWAAEIRDPR----KaARVWLGTFVTAEDAARAYDRAAIEFRG 152
9*******.**********94....36************************998 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 238 aa
Download sequence Send
to blast |
MVEALQNVIT GSTTTNASLF STLENVMNYT LPLYSSPSPS TSMSSTFEPP LLRVPEETES 60 CNFCKIKGCL GCDYFGSTPS NDDSKNKKKS SINVVKKKKK KNNYRGVRQR PWGKWAAEIR 120 DPRKAARVWL GTFVTAEDAA RAYDRAAIEF RGPRAKLNFP FSDYTLTEEQ STSASEQQKE 180 PESQLLEQGN VGLASQMELS VTKDNEFWDQ LMSDNEIQRL LKMMDFSGSP ADFDFSSF
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 86 | 100 | KKKSSINVVKKKKKK |
Functional Description ? help
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Source |
Description |
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
Publications
? help Back to Top |
- Matsuo M,Oelmüller R
REDOX RESPONSIVE TRANSCRIPTION FACTOR1 is involved in age-dependent and systemic stress signaling. Plant Signal Behav, 2015. 10(11): p. e1051279 [PMID:26479402] - Bertea CM,Narayana R,Agliassa C,Rodgers CT,Maffei ME
Geomagnetic Field (Gmf) and Plant Evolution: Investigating the Effects of Gmf Reversal on Arabidopsis thaliana Development and Gene Expression. J Vis Exp, 2018. [PMID:26649488] - Bahieldin A, et al.
Ethylene responsive transcription factor ERF109 retards PCD and improves salt tolerance in plant. BMC Plant Biol., 2016. 16(1): p. 216 [PMID:27716054] - Huang D,Lin W,Deng B,Ren Y,Miao Y
Dual-Located WHIRLY1 Interacting with LHCA1 Alters Photochemical Activities of Photosystem I and Is Involved in Light Adaptation in Arabidopsis. Int J Mol Sci, 2018. [PMID:29112140] - Kong X, et al.
PHB3 Maintains Root Stem Cell Niche Identity through ROS-Responsive AP2/ERF Transcription Factors in Arabidopsis. Cell Rep, 2018. 22(5): p. 1350-1363 [PMID:29386120]
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