PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Peaxi162Scf00148g00161.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
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Family | bHLH | ||||||||
Protein Properties | Length: 154aa MW: 17067.2 Da PI: 5.6809 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 16.4 | 1.6e-05 | 119 | 145 | 4 | 30 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC CS HLH 4 ahnerErrRRdriNsafeeLrellPka 30 h +Er+RR+r+ + f+ L + lP + Peaxi162Scf00148g00161.1 119 DHLLAERKRRERLTQLFAALAKSLPDL 145 57889********************86 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF47459 | 2.18E-5 | 107 | 146 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
PROSITE profile | PS50888 | 8.638 | 115 | 154 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 1.4E-4 | 119 | 146 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 3.78E-4 | 120 | 147 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 154 aa Download sequence Send to blast |
MENTSYNNLE NNIGGEAPFE FPNLLSEMFS SFPNQNPSSS SLEQHGITVV KEASKVAFPS 60 PSSISSHNMI SFGNPAESNY ILGDEQDYDM MSVEKVMNLS SSSTAPPKRI SRSPLLSQDH 120 LLAERKRRER LTQLFAALAK SLPDLKKVLQ SFVL |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 123 | 128 | ERKRRE |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009794821.1 | 5e-50 | PREDICTED: transcription factor NAI1-like | ||||
Refseq | XP_009794822.1 | 5e-50 | PREDICTED: transcription factor NAI1-like | ||||
Refseq | XP_019249041.1 | 3e-49 | PREDICTED: transcription factor bHLH18-like | ||||
TrEMBL | A0A1J6IQ15 | 7e-48 | A0A1J6IQ15_NICAT; Transcription factor bhlh18 | ||||
TrEMBL | A0A1U7XRY9 | 1e-48 | A0A1U7XRY9_NICSY; transcription factor NAI1-like | ||||
STRING | XP_009794821.1 | 2e-49 | (Nicotiana sylvestris) | ||||
STRING | XP_009794822.1 | 2e-49 | (Nicotiana sylvestris) | ||||
STRING | XP_009623662.1 | 2e-48 | (Nicotiana tomentosiformis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA12598 | 11 | 22 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G22750.1 | 1e-09 | bHLH family protein |