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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Peaxi162Scf00132g00057.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
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Family |
ERF |
Protein Properties |
Length: 405aa MW: 45922.6 Da PI: 4.9649 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Peaxi162Scf00132g00057.1 | genome | SGN | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 59.1 | 1.1e-18 | 175 | 224 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
y+GVr+++ +g+WvAeIr p++ r+r +lg+f+tae+Aa a+++ + kl+g
Peaxi162Scf00132g00057.1 175 LYRGVRQRH-WGKWVAEIRLPRN---RTRLWLGTFDTAEDAAMAYDREAYKLRG 224
59******9.**********955...5*************************97 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0010200 | Biological Process | response to chitin |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 405 aa
Download sequence Send
to blast |
MDASEESNKS KIGMEEDFDD NTFDRQQRRP VFEEASMSHR PFKKTQNSSL SQQTLLPSPV 60 PYNNPTSSRH VFPFAFDGTT QQSMENLYQL RPNTPPLFRP VQQQHQNQQQ MISFSPQQCP 120 YPPYFAGELA PSQLKHWNET LNLSPRGKMM MMSRLGQDSK GLFRPQLQHI SATKLYRGVR 180 QRHWGKWVAE IRLPRNRTRL WLGTFDTAED AAMAYDREAY KLRGDNAKLN FPELFIGKDR 240 EGGEASTAPD STPSSPITPH ESSLPEQPEA LNTELLPQPP PPQPPPEDDN HDEDSGMGSS 300 EVTANDEVQV NLENYGLLEG ASSSQSSELV WGEMAEAWFN AIPTGWGPGS PVWDDLDSSN 360 NFMFPPNMHF GNVHQQEPHN SDPQHQHHHD NTDPSSPSCP MRPFF
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | HG975519 | 3e-90 | HG975519.1 Solanum lycopersicum chromosome ch07, complete genome. |