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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Peaxi162Scf00129g00228.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
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Family |
MYB |
Protein Properties |
Length: 306aa MW: 34520.5 Da PI: 7.1501 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Peaxi162Scf00129g00228.1 | genome | SGN | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 56.6 | 5.8e-18 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
+g+WT+eEd lv +v+++G+g+W+++++ g++R+ k+c++rw +yl
Peaxi162Scf00129g00228.1 14 KGPWTPEEDIMLVSYVQEHGPGNWRAVPNSTGLRRCSKSCRLRWTNYL 61
79********************************************97 PP
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2 | Myb_DNA-binding | 48.7 | 1.7e-15 | 67 | 112 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
rg++T +E++ ++++ ++lG++ W++Ia++++ Rt++++k++w+++l
Peaxi162Scf00129g00228.1 67 RGSFTDQEEKMIIQLQALLGNK-WAAIASYLP-ERTDNDIKNYWNTHL 112
89********************.*********.************996 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 306 aa
Download sequence Send
to blast |
MGRPPCCDKI GVKKGPWTPE EDIMLVSYVQ EHGPGNWRAV PNSTGLRRCS KSCRLRWTNY 60 LRPGIKRGSF TDQEEKMIIQ LQALLGNKWA AIASYLPERT DNDIKNYWNT HLKKKLKKLE 120 AASCGSDLYS KDSCLSSLSS TSKGQWERTL QADINTAKLA LQNALSLEKP SAIQEYMATD 180 VKPKNICYPY IKQEGNNSTS TYASSAENIA KLLKQWTKSS SSTNNSENSK GSSSTQLSCN 240 YNNATNDFES ISNFESFEQS KSDQFSQATT PEESKFYGES KRELDDQVPL SVMLENWLFD 300 ENEDLF
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor. {ECO:0000305}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | JF737850 | 0.0 | JF737850.1 Petunia exserta isolate exse205 CAPS marker MYB60 genomic sequence. |