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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Peaxi162Scf00129g00133.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
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Family | ZF-HD | ||||||||
Protein Properties | Length: 101aa MW: 11497 Da PI: 8.2151 | ||||||||
Description | ZF-HD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | ZF-HD_dimer | 99.6 | 2.3e-31 | 22 | 75 | 2 | 59 |
ZF-HD_dimer 2 ekvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrevee 59 ++vrY eC+kNhAas+Gg++vDGC+Efmps t+ +l+CaACgCHRnFHR+eve+ Peaxi162Scf00129g00133.1 22 RTVRYVECQKNHAASVGGYVVDGCREFMPS----ETPGTLTCAACGCHRNFHRKEVES 75 579**************************9....4689*****************986 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
ProDom | PD125774 | 2.0E-19 | 19 | 84 | IPR006456 | ZF-HD homeobox protein, Cys/His-rich dimerisation domain |
Pfam | PF04770 | 1.0E-27 | 24 | 73 | IPR006456 | ZF-HD homeobox protein, Cys/His-rich dimerisation domain |
TIGRFAMs | TIGR01566 | 3.9E-26 | 25 | 73 | IPR006456 | ZF-HD homeobox protein, Cys/His-rich dimerisation domain |
PROSITE profile | PS51523 | 24.167 | 26 | 72 | IPR006456 | ZF-HD homeobox protein, Cys/His-rich dimerisation domain |
Sequence ? help Back to Top |
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Protein Sequence Length: 101 aa Download sequence Send to blast |
MKKVLRRNDS SRNSTNSSFP ARTVRYVECQ KNHAASVGGY VVDGCREFMP SETPGTLTCA 60 ACGCHRNFHR KEVESDAFLI LFSPDDMYMK INWIKSKVED E |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Inhibits zinc finger homeodomain (ZHD) transcription factors by interacting with them to prevent both their nuclear localization and their DNA-binding properties. Involved in integrating signals from multiple hormones by regulating the expression of specific genes. Promotes the formation of ectopic shoot meristems on leaf margins. {ECO:0000269|PubMed:21455630}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | NP_001234189.1 | 7e-41 | mini zinc finger protein | ||||
Swissprot | Q2Q493 | 1e-25 | MIF3_ARATH; Mini zinc finger protein 3 | ||||
TrEMBL | A0A2G2V060 | 1e-42 | A0A2G2V060_CAPBA; Mini zinc finger protein 1 | ||||
TrEMBL | A0A2G3ACA2 | 1e-42 | A0A2G3ACA2_CAPAN; Mini zinc finger protein 1 | ||||
TrEMBL | A0A2G3D9P7 | 1e-42 | A0A2G3D9P7_CAPCH; Mini zinc finger protein 1 | ||||
STRING | Solyc02g087970.1.1 | 3e-40 | (Solanum lycopersicum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA1105 | 24 | 86 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G18835.1 | 6e-28 | mini zinc finger |