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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Peaxi162Scf00128g01777.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
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Family | Trihelix | ||||||||
Protein Properties | Length: 322aa MW: 35761.6 Da PI: 5.5473 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 87.3 | 1.7e-27 | 32 | 123 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrrgk.........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsess 76 rWt+qe+l+Li+++r e+r+rrg+ + +p+W++vs++++++g++r+p+qC+++w+nl+++ykkike+e+ + ++ Peaxi162Scf00128g01777.1 32 RWTRQEILVLIQGKRVAESRVRRGRtggvefgsgQVEPKWASVSSYCKRHGVNRGPVQCRKRWSNLAGDYKKIKEWESHE---TE 113 8**********************97777888888********************************************85...44 PP trihelix 77 stcpyfdqle 86 s +++ ++l+ Peaxi162Scf00128g01777.1 114 SFWVMRNDLR 123 5688888775 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.60 | 6.9E-5 | 32 | 97 | IPR009057 | Homeodomain-like |
PROSITE profile | PS50090 | 6.4 | 32 | 98 | IPR017877 | Myb-like domain |
Pfam | PF13837 | 1.1E-12 | 32 | 117 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0045892 | Biological Process | negative regulation of transcription, DNA-templated | ||||
GO:0050777 | Biological Process | negative regulation of immune response | ||||
GO:0071219 | Biological Process | cellular response to molecule of bacterial origin | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0042803 | Molecular Function | protein homodimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 322 aa Download sequence Send to blast |
MALEPLTDGD SNGRQQPVNG GDDGSKAPRL PRWTRQEILV LIQGKRVAES RVRRGRTGGV 60 EFGSGQVEPK WASVSSYCKR HGVNRGPVQC RKRWSNLAGD YKKIKEWESH ETESFWVMRN 120 DLRRERKLPG FFDREVYDIL DGRGTTGEDM PPAGLALALG PAATATEEEA LFDSGRTAAA 180 DEGLFSDFEQ SVQEEAGVQP TKEAPIPAPT PISEQQYRPF SLESPAPGTS DQKQQTSDPD 240 IGSTREGKKR KRDVTDTDEE ADNLQHQLMK ALERNGNLLS SQLEAQNAHY QLDREQRKDH 300 VNSLVGVLNK LADALGRIAD KL |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional repressor that binds DNA and plays a negative role in regulating microbe-associated molecular patterns-(MAMPs, e.g. flg22, elf18, chitin, and LPS) triggered immunity (PTI) by negatively regulating immune gene expression. {ECO:0000269|PubMed:25770109}. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00288 | DAP | Transfer from AT2G33550 | Download |
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Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009791337.1 | 1e-171 | PREDICTED: uncharacterized protein LOC104238623 isoform X1 | ||||
Refseq | XP_016472490.1 | 1e-171 | PREDICTED: trihelix transcription factor ASR3-like | ||||
Swissprot | Q8VZ20 | 1e-107 | ASR3_ARATH; Trihelix transcription factor ASR3 | ||||
TrEMBL | A0A1S4A785 | 1e-169 | A0A1S4A785_TOBAC; trihelix transcription factor ASR3-like | ||||
TrEMBL | A0A1U7XGZ1 | 1e-169 | A0A1U7XGZ1_NICSY; uncharacterized protein LOC104238623 isoform X1 | ||||
STRING | XP_009791337.1 | 1e-170 | (Nicotiana sylvestris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA1786 | 24 | 60 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G33550.1 | 1e-105 | Trihelix family protein |
Publications ? help Back to Top | |||
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