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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Peaxi162Scf00111g01327.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
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Family | bHLH | ||||||||
Protein Properties | Length: 251aa MW: 28442.3 Da PI: 9.3118 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 32.9 | 1.1e-10 | 90 | 137 | 6 | 55 |
HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 +Er+RR+++ +++Lr l+P+ +K s ++ Le+ v+Y+k+Lq Peaxi162Scf00111g01327.1 90 RDVERQRRRDMARLYQRLRLLIPSkY---LMGKRSISDHLEEIVDYVKDLQ 137 679*********************77...9********************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 12.214 | 84 | 136 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 1.83E-10 | 84 | 152 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 1.7E-7 | 88 | 155 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 8.4E-8 | 90 | 137 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 251 aa Download sequence Send to blast |
MDDNYDQFDY SQLDQLLHFL SSSSPPPPSP PATTTLRKQV PSVSLQTQSS NHVSHVPKRK 60 SNTINANDQD GGKGKPPKEK EPMEKKVIRR DVERQRRRDM ARLYQRLRLL IPSKYLMGKR 120 SISDHLEEIV DYVKDLQKNI EELETKRETL KKIKNICTSD NSHHLTPFSS MKSDDHEDGI 180 RVKQCKEGVE VFVSSAAADL KAGLTLSKVL RVLMEEGMLV NSCVSSNVNT RGDIDLAGLQ 240 FKLMSSSYTQ L |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_019246617.1 | 1e-83 | PREDICTED: transcription factor bHLH120-like | ||||
TrEMBL | A0A1J6IE63 | 3e-82 | A0A1J6IE63_NICAT; Transcription factor bhlh126 | ||||
STRING | XP_009605333.1 | 9e-81 | (Nicotiana tomentosiformis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA12831 | 11 | 18 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G51790.1 | 5e-11 | bHLH family protein |