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Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Peaxi162Scf00110g02110.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
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| Family |
Trihelix |
| Protein Properties |
Length: 405aa MW: 46859.5 Da PI: 9.6317 |
| Description |
Trihelix family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Peaxi162Scf00110g02110.1 | genome | SGN | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | trihelix | 91.6 | 8.2e-29 | 88 | 173 | 1 | 87 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdq 84
rW++qe+l+L+e+r++++++++++++k+p W+evs+ m +++g++rs k+Ckek+enl k+ykk+keg+ +r ++ ++++yf+q
Peaxi162Scf00110g02110.1 88 RWPRQETLTLLEVRSRLDSKFKEANQKGPVWDEVSRIMcEQHGYQRSGKKCKEKFENLYKYYKKTKEGKAGR--QDGKHYRYFRQ 170
8***********************************9989******************************98..55667****** PP
trihelix 85 lea 87
lea
Peaxi162Scf00110g02110.1 171 LEA 173
*85 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 405 aa
Download sequence Send
to blast |
MDDQYGMMDL TQYMDFLCGH KHYEMVMASN TVPQPNNCLT HHHHPHEFLP NSSTMIATTS 60
VSGGGGVTLS ALESGGGGVH GGDGGNGRWP RQETLTLLEV RSRLDSKFKE ANQKGPVWDE 120
VSRIMCEQHG YQRSGKKCKE KFENLYKYYK KTKEGKAGRQ DGKHYRYFRQ LEALYGKTSN 180
RISISETNNI TRNNQEAHLY QDSTKLSDSL VNLSNSSDFD STSSDDSKLN IVMDKDSKEK 240
RKKKKKRGKR SWKAKIRDFI DGQMRKLMEK QEAWLEKMMK TIEHKEQERI LREEEWRKQE 300
AIRIEKRQKF WADERAWIEA RDAALFDALH KLSGEKLKSN NILNDTNGSS IYKENWDGVN 360
SYITKCNKKQ RNNSLSSCYN FQNNEQGGLY CETSRHVPNI RPNNG
|
| Nucleic Localization
Signal ? help
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 |
| No. |
Start |
End |
Sequence |
| 1 | 240 | 246 | RKKKKKR |
| 2 | 241 | 249 | KKKKKRGKR |
| 3 | 242 | 249 | KKKKRGKR |
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor that prevents growth. Regulates perianth architecture in flower, mostly in the second whorl, probably by suppressing growth between initiating sepals, ensuring that they remain separate, and by modulating organ shapes. Required for the establishment of auxin flux. {ECO:0000269|PubMed:10572040, ECO:0000269|PubMed:15269176, ECO:0000269|PubMed:18080804}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Expression within the newly arising sepals is repressed via the PINOID auxin-response pathway. {ECO:0000269|PubMed:15269176}. |
