PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00108g00028.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family NAC
Protein Properties Length: 435aa    MW: 49279.6 Da    PI: 4.5141
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00108g00028.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM56.59.6e-1881342128
                       NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikev.diykv.ePwdLp.kkvkaeek.ew.yfFskrdkkyatgkrknratksg 81 
                               + G rF+Ptdeelv +yL k v + ++e+ + i++  d+y   +P +L  + + +++  ++ yfF++ +k+ +     + +t ++
  Peaxi162Scf00108g00028.1   8 TLGGRFRPTDEELV-RYLMKFVCDAPFEC-NYIRSNkDLYGDkKPYELFdELFPQGDPtDVnYFFAQLKKNLS---AISTSTGHS 87 
                               5799**********.9*************.55655559997549****6343334333344599999888664...556677889 PP

                       NAM  82 yWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                               +     kdk+v++kkg+++g kk++ f ++++++ge t W m+ey l
  Peaxi162Scf00108g00028.1  88 FVVGLDKDKKVTNKKGSVIGSKKSFRFKEEQSSDGETTVWNMKEYCL 134
                               99999****************************************87 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019415.23E-195161IPR003441NAC domain
PROSITE profilePS5100522.0817161IPR003441NAC domain
PfamPF023657.9E-1110134IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 435 aa     Download sequence    Send to blast
MSDDYLLTLG GRFRPTDEEL VRYLMKFVCD APFECNYIRS NKDLYGDKKP YELFDELFPQ  60
GDPTDVNYFF AQLKKNLSAI STSTGHSFVV GLDKDKKVTN KKGSVIGSKK SFRFKEEQSS  120
DGETTVWNMK EYCLSNKILE ELRRRGQIRH EDYVLCRIKR KVKAVYHQKE VGQRMQPIYS  180
EEEENIGMYS SNNSDQNNIV LADDQQPMVG SDQLPMCTSE NMQVMKKKLQ SYFDSFASLI  240
SSTDVPMETS STTGDSNDIV VANQQQPMQL VSQEDQTYYM DYSFVPNNNS EEIITSCYLS  300
LLTSSEELNT TERGEGFAAF VREITGSISN EDQQFENTNN YDAESSVAST DINNYSSWDL  360
LHGQAGINGQ HNDSVPDLLD QSWVSSHGKS GNWTIGSLSV ADALCCCVYW LELKTNSPGS  420
KLVLENSWRN SHSTP
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA13516214
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04410.11e-17NAC domain containing protein 2