PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00078g00546.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family bHLH
Protein Properties Length: 472aa    MW: 52799.8 Da    PI: 6.2523
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00078g00546.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH34.63.4e-11148194455
                               HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                       HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                                h + Er+RR+++ + f  L +++P +     kKl+Ka+ L  +++Y+k+Lq
  Peaxi162Scf00078g00546.1 148 DHAILERKRRQKLTQLFVSLSKVIPGL-----KKLDKASLLGDTIQYMKELQ 194
                               5999***********************.....9******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.627144193IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.26E-9149198No hitNo description
Gene3DG3DSA:4.10.280.105.2E-15149207IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474596.54E-15149206IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000106.5E-9149194IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003537.8E-12150199IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.2E-4352387IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 472 aa     Download sequence    Send to blast
MANDGMDYKG FSHQESMESF DDFILEDDLF LNPNPILSEI YSTAPYNFNS TSNLSYNYTS  60
KENEQKSLIV TSPPSSSSSS SSEVLISFST PSTTSGKKTQ RDLVEISHSL NPLTYHMMSH  120
VPEDNNNACQ ESTGNNNMYK RDSSQAGDHA ILERKRRQKL TQLFVSLSKV IPGLKKLDKA  180
SLLGDTIQYM KELQQRVKVL EEEIENNTSK KASACGRVKD VTSLSKKSDY GSNEEVVPEI  240
NVRVFGKSAL INIYCNKQSG IVGRILSEME TLHLSIRDIN IMSFGPTSLD ISIVAEMENY  300
GTCENVEDIV KDLQSKLRPS HEVITAKNIM YNSHEDNGVH ASSGLSSMRA PMQLDKVSLL  360
GDAIKYMKEL EERKKILEEE VKKTSMKLSF NSSAFDEICT NQGNSYGHLK ERKAEIKAKT  420
VYNNVLIKIQ CSKQSGIAAR IPCEMEKLNL TIHDIRILPF GHTALDISIL AE
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1152157ERKRRQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019244654.11e-113PREDICTED: transcription factor bHLH25-like
TrEMBLA0A1J6JBH11e-112A0A1J6JBH1_NICAT; Transcription factor bhlh25
STRINGXP_009606580.11e-108(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA1623655
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.12e-37bHLH family protein