PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00071g01029.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family AP2
Protein Properties Length: 379aa    MW: 42970.7 Da    PI: 10.0075
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00071g01029.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP235.72.1e-113577147
                       AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaai 47
                              +g+ GV   k  g+++A+Irdp     + k+++lg+f taeeA ka+ 
  Peaxi162Scf00071g01029.1 35 TGFVGVQKAK-MGKFAAQIRDPI----TkKKVWLGSFNTAEEASKAYL 77
                              6899**7655.**********72....36*****************95 PP
2AP229.71.6e-0997135547
                       AP2   5 GVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaai 47 
                               G+ ++k +g+++A I d +     + k+++lg+f+t e+A  a+ 
  Peaxi162Scf00071g01029.1  97 GIQRRK-NGKYAAKISDpF-----ThKQVWLGTFDTVEDASDAYF 135
                               676666.9*********55.....46****************996 PP
3AP2241e-07263303145
                       AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAaka 45 
                               +++ GVr +  +gr+ +eI+ p    ++ kr +lg+f+ +eeA +a
  Peaxi162Scf00071g01029.1 263 THFVGVRKRN-SGRYTSEIYNP----ISkKRLYLGSFDPPEEASQA 303
                               5799***888.8******9996....246**************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.85E-133576No hitNo description
SMARTSM003803.9E-53690IPR001471AP2/ERF domain
PROSITE profilePS5103213.1423696IPR001471AP2/ERF domain
PfamPF008479.7E-53678IPR001471AP2/ERF domain
SuperFamilySSF541717.19E-113683IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.107.9E-133776IPR001471AP2/ERF domain
CDDcd000189.89E-1293134No hitNo description
PROSITE profilePS5103212.00994134IPR001471AP2/ERF domain
SMARTSM003803.4E-494140IPR001471AP2/ERF domain
SuperFamilySSF541712.48E-1096142IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.101.9E-1197134IPR001471AP2/ERF domain
CDDcd000182.00E-12263304No hitNo description
SuperFamilySSF541712.09E-9264311IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.103.6E-12264311IPR001471AP2/ERF domain
SMARTSM003803.3E-5264318IPR001471AP2/ERF domain
PROSITE profilePS5103212.932264325IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 379 aa     Download sequence    Send to blast
METDQQMLVK QAESCVSENK VKSIPFQHYH RGNVTGFVGV QKAKMGKFAA QIRDPITKKK  60
VWLGSFNTAE EASKAYLLNK QEFLATLQSK AKKNLLGIQR RKNGKYAAKI SDPFTHKQVW  120
LGTFDTVEDA SDAYFSKKSE FLDKLVKVYQ GKEPIIHVES SEETSCLMAS VHGKKSSDRC  180
IYTVTNHPKA RRSLLGTQRQ KNGWNADVVR DLVRCKKVCL TTSDTKNCDQ IQPVSASLSV  240
DNDRTLNVAS VGSKKAIDSQ ETTHFVGVRK RNSGRYTSEI YNPISKKRLY LGSFDPPEEA  300
SQAFQSKKLE IQKLVEEKQQ QYNRQTDGKE KLVNSKQDNM PTDSSAGMNR KAQEDEDLWM  360
GQWVQLPDYS HTVNKKMSH
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009771233.19e-67PREDICTED: uncharacterized protein LOC104221795
TrEMBLA0A1J6JBA21e-65A0A1J6JBA2_NICAT; Uncharacterized protein
STRINGXP_009771233.13e-66(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA43411240
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44210.19e-13erf domain protein 9