PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00071g00106.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family AP2
Protein Properties Length: 489aa    MW: 54338.2 Da    PI: 9.2876
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00071g00106.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP228.63.6e-093582253
                       AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkl 53
                              g++GV  +k  g + A I+dp +   +k+++lg+f t++eA ka+   ++++
  Peaxi162Scf00071g00106.1 35 GFPGVNKRK-EGTFGAVIKDPLK---KKTIWLGTFNTPQEASKAYLLKKQEF 82
                              799***999.7*********743...5******************9888775 PP
2AP222.43.2e-0792125945
                       AP2   9 dkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAaka 45 
                               + k+gr+ A+I+d +     + k ++lg+f t eeA +a
  Peaxi162Scf00071g00106.1  92 RLKNGRYGARIKDpF-----ShKEVWLGTFETVEEASEA 125
                               5679*********66.....56**************998 PP
3AP222.52.9e-07276316145
                       AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAaka 45 
                               +++ GVr +  +gr+ +eI+ p    ++ k  +lg f+taeeA +a
  Peaxi162Scf00071g00106.1 276 THFVGVRKRN-SGRYTSEIYNP----ISkKMLYLGMFDTAEEASQA 316
                               5799***888.8******9996....246**************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003800.00373581IPR001471AP2/ERF domain
SuperFamilySSF541715.49E-93582IPR016177DNA-binding domain
PROSITE profilePS5103211.2713596IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.103.0E-103675IPR001471AP2/ERF domain
PROSITE profilePS5103210.29686125IPR001471AP2/ERF domain
SuperFamilySSF541717.85E-887129IPR016177DNA-binding domain
SMARTSM003800.01888134IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.6E-791125IPR001471AP2/ERF domain
CDDcd000186.53E-12276317No hitNo description
SMARTSM003807.9E-5277348IPR001471AP2/ERF domain
PROSITE profilePS5103212.55277342IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.105.8E-12277324IPR001471AP2/ERF domain
SuperFamilySSF541712.29E-9277324IPR016177DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 489 aa     Download sequence    Send to blast
METYQGKLVE EKEESSKSKV NFTPFQRNQR GNAIGFPGVN KRKEGTFGAV IKDPLKKKTI  60
WLGTFNTPQE ASKAYLLKKQ EFLANGLLGT QRLKNGRYGA RIKDPFSHKE VWLGTFETVE  120
EASEANFSKK SEFEKLDKFN TGKGSIICVE SSEEASGVMV KTHGTKSSDA CIYNVTAHPK  180
AKRSLLGTPR RKNGWNATVV RDLIRSKKVL FGTYDTVVDD SEAYFSNKSE FEKLSKGNVE  240
NKPKTCYQIQ TGSPVGVSVD NDQTLNVASV GSKQTTHFVG VRKRNSGRYT SEIYNPISKK  300
MLYLGMFDTA EEASQAFQSK KLEIQKLVKA KQDGKEKLLN AKQGQLESAC GASSLETDVP  360
MSNSSNGGCN QRIESHDISH SMGVQKRKHT SEILLETLGT AEEAFNAYQC NKSVFPRSKK  420
AELQSDMPTN SSAGENQEGE ENEDMWMGQW VQLPGNKEVN ISLKLGMPII DNYGSLLGEF  480
RSIDDLRVC
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009771233.11e-126PREDICTED: uncharacterized protein LOC104221795
TrEMBLA0A1J6J9X41e-126A0A1J6J9X4_NICAT; Uncharacterized protein
STRINGXP_009771233.11e-126(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA43411240
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28370.13e-12ERF domain protein 11