PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00069g01818.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family HD-ZIP
Protein Properties Length: 200aa    MW: 23342.9 Da    PI: 8.2405
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00069g01818.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox56.54.5e-182475657
                              S--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS
                  Homeobox  6 tftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57
                              ++++eq++ Le+ F +++++ +e++ +LA++lg++ rq+++W+qNrRa++k+
  Peaxi162Scf00069g01818.1 24 RLNQEQVKLLEASFDSTKKLETERKLQLARELGVPPRQISIWYQNRRARWKN 75
                              589***********************************************95 PP
2HD-ZIP_I/II104.96.5e-3421112293
               HD-ZIP_I/II   2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekevee 86 
                               + +rl++eqvklLE sF++++kLe+erK +lareLg+ prq+ +W+qnrRAR+k++ lE+dy+aL+ ++++  +e+++Leke+e+
  Peaxi162Scf00069g01818.1  21 NNKRLNQEQVKLLEASFDSTKKLETERKLQLARELGVPPRQISIWYQNRRARWKNQTLEVDYNALQVQLETALSEKRQLEKETER 105
                               579********************************************************************************** PP

               HD-ZIP_I/II  87 Lreelke 93 
                               Lreel++
  Peaxi162Scf00069g01818.1 106 LREELQK 112
                               ****987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5007115.5321676IPR001356Homeobox domain
SMARTSM003895.9E-141880IPR001356Homeobox domain
SuperFamilySSF466892.34E-172185IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.8E-192383IPR009057Homeodomain-like
CDDcd000869.29E-132476No hitNo description
PfamPF000462.0E-152475IPR001356Homeobox domain
PRINTSPR000312.8E-54756IPR000047Helix-turn-helix motif
PROSITE patternPS0002705174IPR017970Homeobox, conserved site
PRINTSPR000312.8E-55672IPR000047Helix-turn-helix motif
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 200 aa     Download sequence    Send to blast
MTSFLNSQNS QKHHYIPKHH NNKRLNQEQV KLLEASFDST KKLETERKLQ LARELGVPPR  60
QISIWYQNRR ARWKNQTLEV DYNALQVQLE TALSEKRQLE KETERLREEL QKANEMLSAL  120
NGGQGQREFI PLSDYSISSC CEEGGNSSFQ EDVRYTWVQK NGPNVLQLGE KNSNLGVNSN  180
QKLNENESHH DLKRKESHLD
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009791458.11e-73PREDICTED: homeobox-leucine zipper protein ATHB-52-like
RefseqXP_016444534.11e-73PREDICTED: homeobox-leucine zipper protein ATHB-52-like
TrEMBLA0A1J6I7E79e-73A0A1J6I7E7_NICAT; Homeobox-leucine zipper protein athb-52
STRINGXP_009791458.14e-73(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA27152453
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69780.12e-24HD-ZIP family protein