PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Regulation |

Orthologous Group |

Basic Information? help Back to Top

TF ID

Peaxi162Scf00062g00102.1

Organism

Petunia axillaris

Taxonomic ID

33119

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia

Family

Trihelix

Protein Properties

Length: 461aa MW: 51822.7 Da PI: 5.0705

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peaxi162Scf00062g00102.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	68.1	1.7e-21	126	222	1	85
trihelix 1 rWtkqevlaLiearremeerlr.rgk..........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr.ts 73 +Wt++ v++Li+++ ++++ + +g+ +kk++W+ vs+ m + g+++sp+qC++k+++lnkrykk++++ +++ ++ Peaxi162Scf00062g00102.1 126 KWTDNVVRLLIQVVACVGDDGSlEGSeglkrksgciQKKGKWKTVSRIMLSNGCHVSPQQCEDKFNDLNKRYKKLNDILGRGtSC 210 7************777777743334566667889********************************************558 PP trihelix 74 essstcpyfdql 85 ++++ ++ d++ Peaxi162Scf00062g00102.1 211 AVVENPVLMDSM 222 899888888877 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF13837	2.3E-18	124	249	No hit	No description

Sequence ? help Back to Top
Protein Sequence Length: 461 aa Download sequence Send to blast
MSSSGMGGGF LSGYNGGFLG MNRLQQPQSN SNNAAHGHPT SHNNVQSPMN TRLGLESDKP 60 IGLMDVKGCM AFGKDKVVGP SNVVNNCNNP INNTSDEDEP SFTEDGNCDN DAVAQGKKGS 120 PWQRMKWTDN VVRLLIQVVA CVGDDGSLEG SEGLKRKSGC IQKKGKWKTV SRIMLSNGCH 180 VSPQQCEDKF NDLNKRYKKL NDILGRGTSC AVVENPVLMD SMPQLSAKAK ETVKKILNSK 240 HLFYREMCAY HNGQKIPDCN ELDFPVHAST GAGQCSKDNH GSQGDEAEEN DESDDDDDES 300 DEEEDNHGDE DARKVGDFDE RMRRVEENGN FLPQTSGNDN LLAEINEFLQ DPTKSKWEQK 360 IWIKKRMLQL EEEKVGIQAE ALELEKRQFK WQRFCRKKDR ELEMERLENE KLILENEHMA 420 LQLKHKELEL DSKKPNISFN SAPLSIDRPL GRDQIDAARY Q

Sequence ? help Back to Top

Protein Sequence Length: 461 aa Download sequence Send to blast

MSSSGMGGGF LSGYNGGFLG MNRLQQPQSN SNNAAHGHPT SHNNVQSPMN TRLGLESDKP  60
IGLMDVKGCM AFGKDKVVGP SNVVNNCNNP INNTSDEDEP SFTEDGNCDN DAVAQGKKGS  120
PWQRMKWTDN VVRLLIQVVA CVGDDGSLEG SEGLKRKSGC IQKKGKWKTV SRIMLSNGCH  180
VSPQQCEDKF NDLNKRYKKL NDILGRGTSC AVVENPVLMD SMPQLSAKAK ETVKKILNSK  240
HLFYREMCAY HNGQKIPDCN ELDFPVHAST GAGQCSKDNH GSQGDEAEEN DESDDDDDES  300
DEEEDNHGDE DARKVGDFDE RMRRVEENGN FLPQTSGNDN LLAEINEFLQ DPTKSKWEQK  360
IWIKKRMLQL EEEKVGIQAE ALELEKRQFK WQRFCRKKDR ELEMERLENE KLILENEHMA  420
LQLKHKELEL DSKKPNISFN SAPLSIDRPL GRDQIDAARY Q

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009768464.1	0.0	PREDICTED: uncharacterized protein LOC104219473
TrEMBL	A0A1U7W1F4	0.0	A0A1U7W1F4_NICSY; uncharacterized protein LOC104219473
STRING	XP_009768464.1	0.0	(Nicotiana sylvestris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA12913	17	20

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76870.1	1e-70