PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00060g00211.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family C2H2
Protein Properties Length: 208aa    MW: 23902.3 Da    PI: 9.7254
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00060g00211.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H2110.00134971123
                              EEETTTTEEESSHHHHHHHHHHT CS
                   zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                              ++C+ C++ Fs+   L  H  +H
  Peaxi162Scf00060g00211.1 49 FECKTCNRQFSSFQALGGHRASH 71
                              89**********99999998887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576671.08E-747117No hitNo description
PfamPF139121.5E-124873IPR007087Zinc finger, C2H2
PROSITE profilePS5015710.2424976IPR007087Zinc finger, C2H2
SMARTSM003550.24971IPR015880Zinc finger, C2H2-like
PROSITE patternPS0002805171IPR007087Zinc finger, C2H2
PfamPF139127.9E-1094119IPR007087Zinc finger, C2H2
SMARTSM003550.595117IPR015880Zinc finger, C2H2-like
PROSITE profilePS501578.91295117IPR007087Zinc finger, C2H2
PROSITE patternPS00028097117IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010200Biological Processresponse to chitin
GO:0071289Biological Processcellular response to nickel ion
GO:2000280Biological Processregulation of root development
GO:0005634Cellular Componentnucleus
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 208 aa     Download sequence    Send to blast
MVALSTKRER EEDNFYSITT MANYLMLLSR QANEHFDKKM NNSSTSRVFE CKTCNRQFSS  60
FQALGGHRAS HKKPRLMGEL HNLQLFHELP KRKTHECSIC GLEFAIGQAL GGHMRRHRAV  120
INDKNLQAPD DQHAPVVKKA NGRRILSLDL NLTPLENDLE FDLRKSNTAP MYAKTSGTEK  180
LHIFEGVPSD WGWLWLGLRV QPYISFSF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
19094KRKTH
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor that may be involved in stress responses. {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAB0004510.0AB000451.1 Petunia x hybrida mRNA for PEThy;ZPT2-5, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009762518.11e-74PREDICTED: zinc finger protein ZAT11-like
RefseqXP_016447026.11e-74PREDICTED: zinc finger protein ZAT11-like
SwissprotQ9SLD43e-39ZAT11_ARATH; Zinc finger protein ZAT11
TrEMBLP937131e-124P93713_PETHY; PEThy;ZPT2-5
STRINGXP_009762518.15e-74(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA36624150
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37430.11e-41C2H2 family protein