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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Peaxi162Scf00057g00055.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
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Family |
FAR1 |
Protein Properties |
Length: 229aa MW: 26533 Da PI: 9.0595 |
Description |
FAR1 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Peaxi162Scf00057g00055.1 | genome | SGN | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | FAR1 | 22.7 | 3.1e-07 | 78 | 118 | 49 | 90 |
FAR1 49 ekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90
e++ r+r e +gC a++k k + +g+wev +++ H+H++
Peaxi162Scf00057g00055.1 78 EERTRKRLEYGCGCMARIKFKIS-NGTWEVCEFDDVHSHPMI 118
45667777778888888888877.***************985 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 229 aa
Download sequence Send
to blast |
MEDLNIEKDL ADQEDHTVKD QDFSIRVHNV YNINKDFVFE IDMKFGSEEE SYNAYNTYVV 60 TKGFGVRKGQ CAKFSPYEER TRKRLEYGCG CMARIKFKIS NGTWEVCEFD DVHSHPMIEE 120 NLRHFILSGR KLTTANDVDS EEVARKYLYQ AKVDITKLQS KLYAQDCDKN MHKFGSTVDP 180 QGSKDLILDP IKKKRKGNGY GRLKPNIEKR RKSASQKASK DKIGLSHKQ
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 193 | 211 | KRKGNGYGRLKPNIEKRRK |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | HG975519 | 5e-47 | HG975519.1 Solanum lycopersicum chromosome ch07, complete genome. |