PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peaxi162Scf00049g00076.1

Organism

Petunia axillaris

Taxonomic ID

33119

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia

Family

FAR1

Protein Properties

Length: 361aa MW: 40981.3 Da PI: 9.6671

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peaxi162Scf00049g00076.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	68.4	1.8e-21	49	133	1	86
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleH 85 +f neYA+++ Fs+rk++ +++k+ g +t+ ++ C keg+r+++k+k +++++r+etrtgC+a++ ++++++g++++tk+eleH Peaxi162Scf00049g00076.1 49 NFHNEYARRIRFSIRKEYVNTNKKLGYVTSWKLACFKEGFRDDDKRK-YQAKNSRKETRTGCQAHIIITRQSTGTYRITKVELEH 132 699***************************************999.9********************************** PP FAR1 86 n 86 Peaxi162Scf00049g00076.1 133 M 133 4 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	9.5E-18	49	133	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 361 aa Download sequence Send to blast
MAVSCPPSSG EPAPRSSLCC VWPAPLDQGS LDHEPKLGLE FDSDDTAINF HNEYARRIRF 60 SIRKEYVNTN KKLGYVTSWK LACFKEGFRD DDKRKYQAKN SRKETRTGCQ AHIIITRQST 120 GTYRITKVEL EHMVHILSSH RKINTVQTYK IDLAKDVGLL SKATFDFMSL QAGGRENLGY 180 TKLDQKNYLR TKRQNALRQG KAVSKHGNAR EYIDKETDRP GVSSIPPEYI LKRGTKNAKA 240 KKIKEIDGQD IEINDPKLIS IACVNEFSSK LNQIMEKTQG KKVNYVNQDG STVNDRAQFD 300 NVNHLNQDWS AKEFFSHNSD LSASQNMVCA SVSQQAEFAL LMGSPTFTQM MTANYFESRR 360 V

Sequence ? help Back to Top

Protein Sequence Length: 361 aa Download sequence Send to blast

MAVSCPPSSG EPAPRSSLCC VWPAPLDQGS LDHEPKLGLE FDSDDTAINF HNEYARRIRF  60
SIRKEYVNTN KKLGYVTSWK LACFKEGFRD DDKRKYQAKN SRKETRTGCQ AHIIITRQST  120
GTYRITKVEL EHMVHILSSH RKINTVQTYK IDLAKDVGLL SKATFDFMSL QAGGRENLGY  180
TKLDQKNYLR TKRQNALRQG KAVSKHGNAR EYIDKETDRP GVSSIPPEYI LKRGTKNAKA  240
KKIKEIDGQD IEINDPKLIS IACVNEFSSK LNQIMEKTQG KKVNYVNQDG STVNDRAQFD  300
NVNHLNQDWS AKEFFSHNSD LSASQNMVCA SVSQQAEFAL LMGSPTFTQM MTANYFESRR  360
V

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA3021	17	40

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	4e-22	FAR1-related sequence 5