PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00040g00320.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family HD-ZIP
Protein Properties Length: 779aa    MW: 86010.5 Da    PI: 5.1558
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00040g00320.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox44.62.4e-14701071855
                               HHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS
                  Homeobox  18 lFeknrypsaeereeLAkklgLterqVkvWFqNrRake 55 
                               +F++n+ p+ ++reeLAkklg++ +qVk+W+qNrR+  
  Peaxi162Scf00040g00320.1  70 AFKENPRPDDKTREELAKKLGMNSKQVKFWYQNRRTHI 107
                               7**********************************865 PP
2START152.63.3e-482574952203
                               HHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGG....... CS
                     START   2 laeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddke....... 70 
                               la++a++el+k+a+ +ep+Wvks     e +  +e++  f++  +     +++ea +as++v+ ++ +lve+l+d+         
  Peaxi162Scf00040g00320.1 257 LALAAMNELLKLAEIGEPLWVKSLdgggETLSLEEYIPAFTPCTGmkpgyFTTEATKASAIVIINSLTLVETLMDSVVlffsavr 341
                               6899********************9999999999999999998779*******************************99****** PP

                               ..........CT-TT-S....EEEEEEEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TT CS
                     START  71 ..........qWdetla....kaetlevissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseq 134
                                         +W e++     k +  +viss       g+lql+++e+q ls +vp R++ f+R+++q+ +g w++vdvS ds q
  Peaxi162Scf00040g00320.1 342 hffglfvmvrRWVEMFScivgKTSADDVISSSsvgswsGTLQLIQTEFQILSDMVPvRKVKFLRFCKQHAEGLWAVVDVSADSVQ 426
                               *****************999977777888888888************************************************** PP

                               S--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHHHHHHHHHHHHHHHHHHHHHHTXXX CS
                     START 135 kppesssvvRaellpSgiliepksnghskvtwvehvdlkgrlphwllrslvksglaegaktwvatlqrq 203
                               + ++  ++  +++lpSg++i++++nghskvtw+eh++++++++  l+r+l++ gl +ga++w+atlqr 
  Peaxi162Scf00040g00320.1 427 EGSQPDEIGNCRRLPSGCVIQDMPNGHSKVTWIEHMEYNESVVNHLYRPLIRIGLGFGAQRWMATLQRM 495
                               ***9999************************************************************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003893.8E-654114IPR001356Homeobox domain
CDDcd000863.93E-1269111No hitNo description
Gene3DG3DSA:1.10.10.602.2E-1369115IPR009057Homeodomain-like
PfamPF000469.7E-1270107IPR001356Homeobox domain
SuperFamilySSF466895.31E-1270117IPR009057Homeodomain-like
PROSITE profilePS5007113.36271110IPR001356Homeobox domain
PROSITE patternPS00027085108IPR017970Homeobox, conserved site
PROSITE profilePS5084835.336247501IPR002913START domain
SuperFamilySSF559616.87E-23248496No hitNo description
CDDcd088755.63E-97251497No hitNo description
SMARTSM002342.2E-28256498IPR002913START domain
PfamPF018526.4E-33352495IPR002913START domain
SuperFamilySSF559619.2E-7534773No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0008289Molecular Functionlipid binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 779 aa     Download sequence    Send to blast
MSEKGESSND HVVNERPSED ENESSDNLLG GASADEQNSQ RGDSDMSEKG ESSNHVVNGR  60
PSEDENESSA FKENPRPDDK TREELAKKLG MNSKQVKFWY QNRRTHIKWQ SEKHESGMLK  120
QQNDQLRVEQ VTLKKAMSNP VCNRCGSQAS VAKINDDEHQ AKIEHEQLKY EVKRITLLAE  180
KLSVPFVSLE GSMHSAMENS AVGIGGFGGI NSVETQQPME FDLNKDPPSP LLVTPPQPTP  240
SLDNVDVSYD KSKLMDLALA AMNELLKLAE IGEPLWVKSL DGGGETLSLE EYIPAFTPCT  300
GMKPGYFTTE ATKASAIVII NSLTLVETLM DSVVLFFSAV RHFFGLFVMV RRWVEMFSCI  360
VGKTSADDVI SSSSVGSWSG TLQLIQTEFQ ILSDMVPVRK VKFLRFCKQH AEGLWAVVDV  420
SADSVQEGSQ PDEIGNCRRL PSGCVIQDMP NGHSKVTWIE HMEYNESVVN HLYRPLIRIG  480
LGFGAQRWMA TLQRMSEFME VMMSPVDATS DQAVVCSSGR RSIAMLAQRM ARSFCGGVCA  540
TIHKWDPIQV ANGEDAKLMM RKNIGDPGEL TGVILTATNT FWLPVKQHRL IEFLMNKEKR  600
SQWDFLTNSD TLQHMAYIAK GQNPDNSISL FRANVSVIDF SINIFFWGQT SKEDDTNADQ  660
NSKLILQDTS SDATGFLLVY ATVDTSAMKV VMDGGDSSSV AFLPSGISIV PDCFQDFSAA  720
TNSTGTSHGF SCTGSLVTIG FQILVNSLPT AKLKIKSVKK VNDLIARTIK GIKAAFECE
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016449095.10.0PREDICTED: homeobox-leucine zipper protein ANTHOCYANINLESS 2-like
TrEMBLA0A1S3YA530.0A0A1S3YA53_TOBAC; homeobox-leucine zipper protein ANTHOCYANINLESS 2-like
STRINGXP_009589494.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA1531837
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G61150.10.0homeodomain GLABROUS 1