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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Peaxi162Scf00038g02229.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
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Family |
ERF |
Protein Properties |
Length: 378aa MW: 41833.9 Da PI: 4.4242 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Peaxi162Scf00038g02229.1 | genome | SGN | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 60.7 | 3.5e-19 | 110 | 159 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
+y+G+r+++ +g+W+AeIrdps+ r++lg+f taeeAa+a++ +++++g
Peaxi162Scf00038g02229.1 110 QYRGIRQRP-WGKWAAEIRDPSK---GVRVWLGTFNTAEEAARAYDVEARRIRG 159
69*******.**********965...4************************998 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0070483 | Biological Process | detection of hypoxia |
GO:0005634 | Cellular Component | nucleus |
GO:0005886 | Cellular Component | plasma membrane |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 378 aa
Download sequence Send
to blast |
MCGGAIISDY IPPNRTSRRL TAELLWGRSD LSKKSKNPSN YHSKPLRSQI VDLDDDFEAD 60 FQEFKDFSDD EDVKPFAFSA PKQSTGSKSV KSADSEKDAD SSSKRKRKNQ YRGIRQRPWG 120 KWAAEIRDPS KGVRVWLGTF NTAEEAARAY DVEARRIRGN KAKVNFPDEA PVPSSRLAVK 180 VNPQKVLPSL DSVQPDTTVM NNLRNGYYDS LGFLEEKPVA KQYGYEDGGS TSVDTGFDSF 240 APSAGADIYF NSDVGSNSFD CSDFGWGEPC TRTPEISSVL SAAIESNEAQ FVEDARPEKK 300 LKSDPNNPVA DDGNTVNELS EELSAFESEM KFLQIPYLEG NWDASADTFL NTSATQDGEN 360 AMDLWSFDDV PSLMGGVY
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | HQ259596 | 0.0 | HQ259596.1 Petunia x hybrida ethylene-responsive-element-binding factor 2 mRNA, complete cds. |