PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00037g00014.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family bHLH
Protein Properties Length: 328aa    MW: 37528 Da    PI: 5.4137
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00037g00014.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH47.24e-15127178155
                               CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                       HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                               +r++h ++Er+RR+++N+ ++ Lr+l+P++   + ++ + a+i+  A++Y+k+L+
  Peaxi162Scf00037g00014.1 127 QRMTHIAVERNRRKQMNEYLSVLRTLMPES---YVQRGDQASIVSGAINYVKELE 178
                               79****************************...9******************996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:4.10.280.102.9E-15125182IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.09E-14125182No hitNo description
SuperFamilySSF474598.37E-18126195IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.923126177IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.3E-12127178IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.8E-11132183IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 328 aa     Download sequence    Send to blast
MALEAVTHQQ QYLYTLLGNW GGGSGSGNFD DHNNEAFEYL ENQNVAAEEY EHYSNWNLPP  60
PLLVETQVDF HQWDQNCSTI LHHDFRIPDQ PELLPQLDSP VAISSTTGRP RRRRTRTKKN  120
EEEIENQRMT HIAVERNRRK QMNEYLSVLR TLMPESYVQR GDQASIVSGA INYVKELEQQ  180
LQFLSGQKHF NDYKQDVVSG ETPSFSEFFR IPQYSTTMAT ASSENGGSAN EFYMNQVPAA  240
ADIEVTMVEN HANLKIRSKR RPRLVPRIIS GLESLRLTVL HLNVTKVDQF VFCSLNLKVE  300
EECKMSSVED IAAVVNQILG RIHEEALA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1108115RPRRRRTR
2127138RMTHIAVERNRR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019258700.11e-172PREDICTED: transcription factor bHLH94-like
SwissprotQ9C7T41e-68BH096_ARATH; Transcription factor bHLH96
TrEMBLA0A314LGS01e-171A0A314LGS0_NICAT; Transcription factor bhlh96
STRINGXP_009617734.11e-169(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA132271518
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72210.13e-71bHLH family protein
Publications ? help Back to Top
  1. Skinner MK,Rawls A,Wilson-Rawls J,Roalson EH
    Basic helix-loop-helix transcription factor gene family phylogenetics and nomenclature.
    Differentiation, 2010. 80(1): p. 1-8
    [PMID:20219281]
  2. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]