PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Regulation |

Orthologous Group |

Basic Information? help Back to Top

TF ID

Peaxi162Scf00031g00241.1

Organism

Petunia axillaris

Taxonomic ID

33119

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia

Family

Trihelix

Protein Properties

Length: 333aa MW: 38828.6 Da PI: 4.4261

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peaxi162Scf00031g00241.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	42.6	1.6e-13	100	187	2	86
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikeg.ekkr.tsessstcpyfd 83 Wt++e +L+e+ e+ +l+r++l+ +W ev++k+ + g+e++ +C++ ++ l+k+ykk+ + e+++ + +s++p+f+ Peaxi162Scf00031g00241.1 100 WTEEESFVLLEVWGERFLELGRRSLRSEDWVEVAEKVsEMIGVEKGESECRNQLDALKKKYKKEMAKmERSGgGGGFHSKWPFFK 184 ***********************************5568*****************98655055554588899** PP trihelix 84 qle 86 +++ Peaxi162Scf00031g00241.1 185 KMD 187 8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50090	6.098	92	157	IPR017877	Myb-like domain
Pfam	PF13837	1.7E-19	99	189	No hit	No description

Sequence ? help Back to Top
Protein Sequence Length: 333 aa Download sequence Send to blast
MEDSDDESEY PSRPNNNNSI YTPSLRSRRS IRNPSSSSSS YNRNTHYGYN DFHYTNDLDS 60 EEEDDQELSS GENGYDGIPK KRKLESLNYQ FAPRSKGGMW TEEESFVLLE VWGERFLELG 120 RRSLRSEDWV EVAEKVSEMI GVEKGESECR NQLDALKKKY KKEMAKMERS GGGGGFHSKW 180 PFFKKMDMLM NLRMKGHCGL GCGLDSGEYV FMDPRMYLDR SNVLDEMRDS PAGSDAENDD 240 DEEEEEMEQG DDESAKMLAD SIQRFGQIYE KIENSKRKQM MELEKMRRDM QRELELQKKQ 300 IVERAQAEIA KIRDRNDNDD DDDEDNKDNV EKL

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009783625.1	1e-148	PREDICTED: uncharacterized protein LOC104232187 isoform X1
Refseq	XP_016496917.1	1e-148	PREDICTED: trihelix transcription factor ASIL1-like isoform X1
Refseq	XP_016574195.1	1e-148	PREDICTED: uncharacterized protein LOC107871832
TrEMBL	A0A2G2WS77	1e-151	A0A2G2WS77_CAPBA; Uncharacterized protein
STRING	XP_009783625.1	1e-148	(Nicotiana sylvestris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA12060	20	22

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24490.1	1e-73	Trihelix family protein