PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00028g00183.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family bZIP
Protein Properties Length: 155aa    MW: 18004.1 Da    PI: 6.2642
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00028g00183.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_138.91.8e-122577557
                              CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                    bZIP_1  5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57
                              ++ +r+q+NRe+ArrsR RK++ ++     v++L++eN+      +  +k++ 
  Peaxi162Scf00028g00183.1 25 RKRKRMQSNRESARRSRMRKQKHLDDMMAQVEQLKKENMNILASTNVTTKNYV 77
                              5789**********************************987666665555555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1704.2E-101864No hitNo description
SMARTSM003381.4E-162185IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.1742386IPR004827Basic-leucine zipper domain
PfamPF001701.2E-92576IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.0E-112577No hitNo description
CDDcd147029.47E-182676No hitNo description
PROSITE patternPS0003602843IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009845Biological Processseed germination
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 155 aa     Download sequence    Send to blast
MATSSGNSSQ NIQNSGSEED LMNERKRKRM QSNRESARRS RMRKQKHLDD MMAQVEQLKK  60
ENMNILASTN VTTKNYVTVE AENSILRAQM MELNQRLHSL NDIISYINSN NNNGTTVETF  120
EDIHNCPENF MNNPWNLMYA NQPIMASADM LYDQY
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12445RKRKRMQSNRESARRSRMRKQK
23744RRSRMRKQ
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that binds to the DNA G-box motif 5'-CACGTG-3' of MAN7 promoter. Involved in the positive regulation of seed germination through MAN7 gene activation. MAN7 is required for both, loosening of the micropylar endosperm, and rupture of the seed coat in germinating seeds. {ECO:0000269|PubMed:23461773}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00239DAPTransfer from AT1G75390Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009778344.11e-66PREDICTED: ocs element-binding factor 1-like
RefseqXP_016452795.11e-66PREDICTED: bZIP transcription factor 53-like
SwissprotC0Z2L53e-50BZP44_ARATH; bZIP transcription factor 44
TrEMBLA0A1S3YL182e-65A0A1S3YL18_TOBAC; bZIP transcription factor 53-like
TrEMBLA0A1U7WUG92e-65A0A1U7WUG9_NICSY; ocs element-binding factor 1-like
STRINGXP_009778344.14e-66(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA53724123
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75390.19e-43basic leucine-zipper 44
Publications ? help Back to Top
  1. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]
  2. Pedrotti L, et al.
    Snf1-RELATED KINASE1-Controlled C/S1-bZIP Signaling Activates Alternative Mitochondrial Metabolic Pathways to Ensure Plant Survival in Extended Darkness.
    Plant Cell, 2018. 30(2): p. 495-509
    [PMID:29348240]