PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Peaxi162Scf00025g02322.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
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Family | Trihelix | ||||||||
Protein Properties | Length: 497aa MW: 56582.2 Da PI: 7.9138 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 92.1 | 5.9e-29 | 40 | 123 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdql 85 rW+++e+laL+++r++m+ ++r++ lk+plW+e+s+km+e g++rs+k+C+ek+en+ k++k++k+g+++r+ + +++++f+ql Peaxi162Scf00025g02322.1 40 RWPHEETLALLNIRSQMDLAFRDSILKGPLWDEISRKMSELGYNRSAKKCREKFENIYKYHKRTKDGRSGRQ--TGKHYRFFEQL 122 8********************************************************************984..5557******9 PP trihelix 86 e 86 e Peaxi162Scf00025g02322.1 123 E 123 7 PP | |||||||
2 | trihelix | 94.6 | 9.7e-30 | 352 | 437 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrr.gklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdq 84 rW+k ev aLi +r++++ ++++ g++k+plWe++s +m++ g+ r++k+Ckekwen+nk+y+++ke++k+r +e+s+tcpyf+ Peaxi162Scf00025g02322.1 352 RWPKAEVEALIGIRTNLDLQYNDnGSSKGPLWEDISGAMKKLGYDRNAKRCKEKWENINKYYRRVKESQKRR-PEDSKTCPYFHI 435 8*********************7589********************************************97.9**********8 PP trihelix 85 le 86 l+ Peaxi162Scf00025g02322.1 436 LD 437 87 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50090 | 7.608 | 33 | 97 | IPR017877 | Myb-like domain |
SMART | SM00717 | 3.3E-4 | 37 | 99 | IPR001005 | SANT/Myb domain |
Pfam | PF13837 | 3.7E-20 | 39 | 123 | No hit | No description |
CDD | cd12203 | 1.12E-24 | 39 | 104 | No hit | No description |
PROSITE profile | PS50090 | 6.748 | 345 | 410 | IPR017877 | Myb-like domain |
SMART | SM00717 | 4.6 | 349 | 412 | IPR001005 | SANT/Myb domain |
Pfam | PF13837 | 2.4E-22 | 351 | 439 | No hit | No description |
CDD | cd12203 | 3.86E-22 | 351 | 417 | No hit | No description |
Sequence ? help Back to Top |
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Protein Sequence Length: 497 aa Download sequence Send to blast |
MLEASADGGG GAAVTQVVEL KNDGSDGGGS GGDKNSSGNR WPHEETLALL NIRSQMDLAF 60 RDSILKGPLW DEISRKMSEL GYNRSAKKCR EKFENIYKYH KRTKDGRSGR QTGKHYRFFE 120 QLELLDNQSS LLPSNHTMSM PVPMPMPMTM IKAATSGCQD FRMDPCRNLQ GFNPEFMSTS 180 TSTTSSSGKE SDGRVLKKRK LAGYFERLVK EVLDKQADLH NKFLEAIEKY EKDRMAREEA 240 WKMQETARIK KEQEALANER AIAAAKDAAV IAFLQKISEQ SVQVQLPLDL SQVSHERHTE 300 ERESESVKPG GSQENVLHQD NDKQQENMLD KNIDKQENDS AGENSFNTSS SRWPKAEVEA 360 LIGIRTNLDL QYNDNGSSKG PLWEDISGAM KKLGYDRNAK RCKEKWENIN KYYRRVKESQ 420 KRRPEDSKTC PYFHILDSIY QNKSKKQMLI SDNPGSNVKA GELLMQIINQ QQQQENQQQQ 480 QQSETGDIYR QSVEQSQ |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor that binds specific DNA sequence. {ECO:0000250}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_019267394.1 | 0.0 | PREDICTED: trihelix transcription factor GT-2-like | ||||
Swissprot | Q39117 | 3e-66 | TGT2_ARATH; Trihelix transcription factor GT-2 | ||||
TrEMBL | A0A2G2VFX7 | 0.0 | A0A2G2VFX7_CAPBA; Trihelix transcription factor GTL1 | ||||
STRING | XP_009626647.1 | 0.0 | (Nicotiana tomentosiformis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA9794 | 23 | 28 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G76880.1 | 1e-61 | Trihelix family protein |