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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Peaxi162Scf00022g00098.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
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Family |
MIKC_MADS |
Protein Properties |
Length: 270aa MW: 31152.6 Da PI: 10.2154 |
Description |
MIKC_MADS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Peaxi162Scf00022g00098.1 | genome | SGN | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | SRF-TF | 99.1 | 1.8e-31 | 67 | 116 | 1 | 50 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS
SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50
krien++nrqvtf+kRrng+lKKA+ELSvLCdaeva+i+fss+g+lyey+
Peaxi162Scf00022g00098.1 67 KRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYA 116
79***********************************************8 PP
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2 | K-box | 95.3 | 9.7e-32 | 135 | 224 | 4 | 93 |
K-box 4 ssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelq 88
s++ s +ea+a+++qqe++kL+++i nLq+++R++lGe+L L+l++L++Leq++ek+++kiR+kKnell+++ie++qk+ e++
Peaxi162Scf00022g00098.1 135 SNTGSIAEANAQYYQQEASKLRAQIGNLQNQNRNFLGESLAALNLRDLRNLEQKIEKGISKIRAKKNELLFAEIEYMQKRIAETE 219
4444599**************************************************************************9999 PP
K-box 89 eenka 93
+ +++
Peaxi162Scf00022g00098.1 220 RSQQM 224
88765 PP
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Protein Features
? help Back to Top |
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Database |
Entry ID |
E-value |
Start |
End |
InterPro ID |
Description |
PROSITE profile | PS50066 | 33.669 | 59 | 119 | IPR002100 | Transcription factor, MADS-box |
SMART | SM00432 | 3.4E-41 | 59 | 118 | IPR002100 | Transcription factor, MADS-box |
CDD | cd00265 | 2.04E-45 | 60 | 136 | No hit | No description |
SuperFamily | SSF55455 | 4.45E-33 | 60 | 132 | IPR002100 | Transcription factor, MADS-box |
PROSITE pattern | PS00350 | 0 | 61 | 115 | IPR002100 | Transcription factor, MADS-box |
PRINTS | PR00404 | 5.6E-33 | 61 | 81 | IPR002100 | Transcription factor, MADS-box |
Pfam | PF00319 | 1.1E-26 | 68 | 115 | IPR002100 | Transcription factor, MADS-box |
PRINTS | PR00404 | 5.6E-33 | 81 | 96 | IPR002100 | Transcription factor, MADS-box |
PRINTS | PR00404 | 5.6E-33 | 96 | 117 | IPR002100 | Transcription factor, MADS-box |
Pfam | PF01486 | 4.5E-22 | 143 | 222 | IPR002487 | Transcription factor, K-box |
PROSITE profile | PS51297 | 13.017 | 145 | 230 | IPR002487 | Transcription factor, K-box |
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
Protein Sequence Length: 270 aa
Download sequence Send
to blast |
MKKVEKRKLN LLYMSLSITG HIDKFMSFFP KKQVTFWHDG AAMEFQSDLT REISPQRKLG 60 RGKIEIKRIE NTTNRQVTFC KRRNGLLKKA YELSVLCDAE VALIVFSSRG RLYEYANNSV 120 KATIERYKKA CSDSSNTGSI AEANAQYYQQ EASKLRAQIG NLQNQNRNFL GESLAALNLR 180 DLRNLEQKIE KGISKIRAKK NELLFAEIEY MQKRIAETER SQQMNLMPGS SSYDLVPPQQ 240 SFDARNYLQV NGLQTNNHYP RQDQPPLQLV
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1tqe_P | 3e-20 | 59 | 127 | 1 | 69 | Myocyte-specific enhancer factor 2B |
1tqe_Q | 3e-20 | 59 | 127 | 1 | 69 | Myocyte-specific enhancer factor 2B |
1tqe_R | 3e-20 | 59 | 127 | 1 | 69 | Myocyte-specific enhancer factor 2B |
1tqe_S | 3e-20 | 59 | 127 | 1 | 69 | Myocyte-specific enhancer factor 2B |
6c9l_A | 3e-20 | 59 | 127 | 1 | 69 | Myocyte-specific enhancer factor 2B |
6c9l_B | 3e-20 | 59 | 127 | 1 | 69 | Myocyte-specific enhancer factor 2B |
6c9l_C | 3e-20 | 59 | 127 | 1 | 69 | Myocyte-specific enhancer factor 2B |
6c9l_D | 3e-20 | 59 | 127 | 1 | 69 | Myocyte-specific enhancer factor 2B |
6c9l_E | 3e-20 | 59 | 127 | 1 | 69 | Myocyte-specific enhancer factor 2B |
6c9l_F | 3e-20 | 59 | 127 | 1 | 69 | Myocyte-specific enhancer factor 2B |
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Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor involved in regulating genes that determines stamen and carpel development in wild-type flowers. {ECO:0000250}. |