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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Peaxi162Scf00017g03011.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
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Family |
ERF |
Protein Properties |
Length: 213aa MW: 24341.2 Da PI: 8.3118 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Peaxi162Scf00017g03011.1 | genome | SGN | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 53.4 | 6.3e-17 | 44 | 93 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
++ GVr+++ +grWvAeI+d s ++ r +lg+f+ aeeAa a++ a++ l+g
Peaxi162Scf00017g03011.1 44 KFIGVRQRP-SGRWVAEIKDSS---QKLRLWLGTFDIAEEAALAYDSAARLLRG 93
899******.7*********42...36***********************9998 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 213 aa
Download sequence Send
to blast |
MENSKSPSEP LNNTSSKNKD DLFQEKQVTK RKSKQLPSRN DGKKFIGVRQ RPSGRWVAEI 60 KDSSQKLRLW LGTFDIAEEA ALAYDSAARL LRGRNAKTNF KYQQESCNML EKNPRLYQLL 120 KHAIMKKLAG KCQNECLQTQ ESTIVCASDG DKNKEEIFRL QHGISSKVYS SVVVAPSFSI 180 TQSGREEEEE EEENQYQAAE FFDSLFSHAN HEL
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | HG975442 | 1e-41 | HG975442.1 Solanum pennellii chromosome ch03, complete genome. |