PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Peaxi162Scf00015g00133.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
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Family | bHLH | ||||||||
Protein Properties | Length: 275aa MW: 30472.8 Da PI: 6.9642 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 13 | 0.00019 | 170 | 206 | 14 | 55 |
HHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 14 driNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +++ +++ +L +l+ + +K + a++L +A+ YI+ Lq Peaxi162Scf00015g00133.1 170 EKLGDRITTLHQLVSPF-----GKTDTASVLSEAIGYIRFLQ 206 56778899999999887.....8******************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 11.204 | 156 | 205 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 6.57E-6 | 168 | 210 | No hit | No description |
SuperFamily | SSF47459 | 4.06E-10 | 168 | 216 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 1.7E-7 | 170 | 213 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 275 aa Download sequence Send to blast |
MASGNPTNWW NNMMLNGNNM HPPHESHQQL SSSSLQHFYG SSNFLADNPS QDVPSRSWSQ 60 LLLAGLSSDQ EKSGMSHFHQ YKKLENWEDQ SLNSIQQYPL SSSFRVPVVD VKPEFVGQMY 120 GNYHHQDLPA VSSPANSCVT TTLNFSGNNE IRKVEAKHQH PDHSSEVRKE KLGDRITTLH 180 QLVSPFGKTD TASVLSEAIG YIRFLQGQIQ ALSSPYLGNV AGSMGHTHQQ SESQHRVKDL 240 RSRGLCLVPI SCTQHVGSDT TVGDYWAPAL GGGYL |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_019224898.1 | 1e-139 | PREDICTED: transcription factor bHLH68-like isoform X2 | ||||
Swissprot | Q8S3D1 | 2e-41 | BH068_ARATH; Transcription factor bHLH68 | ||||
TrEMBL | A0A314KWA3 | 1e-138 | A0A314KWA3_NICAT; Transcription factor bhlh68 | ||||
STRING | XP_009628050.1 | 1e-134 | (Nicotiana tomentosiformis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA1519 | 22 | 47 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G29100.1 | 5e-44 | bHLH family protein |
Publications ? help Back to Top | |||
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