PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peaxi162Scf00014g00026.1

Organism

Petunia axillaris

Taxonomic ID

33119

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia

Family

FAR1

Protein Properties

Length: 284aa MW: 32897.4 Da PI: 5.1062

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peaxi162Scf00014g00026.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	52.1	2.2e-16	62	143	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleH 85 Y++YA++ Fsvrk+k+ + g +++fvC+++g+++e+++k ++tr +C a++ k+++ ++ + v+ ++++H Peaxi162Scf00014g00026.1 62 LYCRYARSKDFSVRKEKQDYFPGVGVLREKRFVCYRHGEKDEKQRK--------SNTRSKCPAMIIFKRQSpTSPFIVDIFVKDH 138 7***********************************99998777........899**********9********* PP FAR1 86 nHela 90 nHe+a Peaxi162Scf00014g00026.1 139 NHEMA 143 *97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	3.6E-13	62	143	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 284 aa Download sequence Send to blast
MSTVDEKTNN VESHDELLDD IKTEEEEEQN KIEEEVSENV IIELEEKMKD QIANDEEEAY 60 NLYCRYARSK DFSVRKEKQD YFPGVGVLRE KRFVCYRHGE KDEKQRKSNT RSKCPAMIIF 120 KRQSPTSPFI VDIFVKDHNH EMASPKKKHL LRSARLVTKA KVIENKVNAG IKPATTYSYL 180 AEEAGRADVL GYSKKDCFNF INQLMKSKVE AGDAQNKPVK YSFIGMFNLT LKAVLPPRTI 240 ITDQAQGMTI AIREVMCMSE CDSIPEFEET WELMLTTFNV EEYE

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_015078453.1	6e-93	protein FAR1-RELATED SEQUENCE 5-like
TrEMBL	A0A2G2X675	3e-91	A0A2G2X675_CAPBA; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA13574	3	3

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-15	FAR1-related sequence 5