|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Peaxi162Scf00013g01023.1 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
|
Family |
MYB |
Protein Properties |
Length: 269aa MW: 30908.2 Da PI: 4.9927 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Peaxi162Scf00013g01023.1 | genome | SGN | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 51.4 | 2.6e-16 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
rg+W++ Ed++l++++ ++G ++W+ ++ g+ R++k+c++rw +yl
Peaxi162Scf00013g01023.1 14 RGPWSKKEDDILINYIDKHGHPNWRQLPKLAGLLRCGKSCRLRWTNYL 61
89******************************99************97 PP
|
2 | Myb_DNA-binding | 49 | 1.4e-15 | 67 | 110 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
rg++T+eE++ ++++++ lG++ W+ Ia++++ gRt++++k+ w++
Peaxi162Scf00013g01023.1 67 RGNFTPEEEDTIIKLHQVLGNR-WSVIAAKLP-GRTDNEIKNIWHT 110
89********************.*********.*********9986 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 269 aa
Download sequence Send
to blast |
MGRTPCCEKL GLNRGPWSKK EDDILINYID KHGHPNWRQL PKLAGLLRCG KSCRLRWTNY 60 LRPEIKRGNF TPEEEDTIIK LHQVLGNRWS VIAAKLPGRT DNEIKNIWHT RLKKKMNQSQ 120 IQEKTPDIRE QPSETSKSED STNIQENTEI SSPKPNSNNQ HEPSSSLRSS SSITSSSEGS 180 CSNTTTTSSH IDESRDQMNL ENLLEVDDNF WSEVLWATPA DDSKDNNLDF SLSSVEKNYE 240 LDSSLNDNWL WDDLFSRANE FLLEFPELV
|
Functional Description ? help
Back to Top |
Source |
Description |
UniProt | Plays a regulatory role in meristem function. Functions as component of a regulatory network controlling the establishment and/or development of the shoot system by the regulation of apical meristem function (PubMed:9681014). May play a role in tolerance to boric acid (PubMed:16861809). {ECO:0000269|PubMed:16861809, ECO:0000269|PubMed:9681014}. |
Regulation -- Description ? help
Back to Top |
Source |
Description |
UniProt | INDUCTION: Induced by abscisic acid (ABA), drought, light and wounding in leaves. Down-regulated by drought and ABA in roots. {ECO:0000269|PubMed:9681014}. |