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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Peaxi162Scf00011g00821.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
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Family | ZF-HD | ||||||||
Protein Properties | Length: 200aa MW: 22659 Da PI: 10.7194 | ||||||||
Description | ZF-HD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | ZF-HD_dimer | 55.4 | 1.5e-17 | 20 | 72 | 5 | 58 |
ZF-HD_dimer 5 rYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreve 58 Y eC++N ++a+DGC+ f p gt++al+C CgCH nF Rr ++ Peaxi162Scf00011g00821.1 20 LYGECMRNRSTGSMTYATDGCQGFAPG-YPLGTIEALRCQTCGCHQNFRRRLET 72 6*************************8.4559******************9765 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04770 | 2.2E-15 | 20 | 70 | IPR006456 | ZF-HD homeobox protein, Cys/His-rich dimerisation domain |
ProDom | PD125774 | 1.0E-7 | 21 | 69 | IPR006456 | ZF-HD homeobox protein, Cys/His-rich dimerisation domain |
PROSITE profile | PS51523 | 16.769 | 21 | 70 | IPR006456 | ZF-HD homeobox protein, Cys/His-rich dimerisation domain |
Sequence ? help Back to Top |
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Protein Sequence Length: 200 aa Download sequence Send to blast |
MLRIRANKTW ANRRSRSLPL YGECMRNRST GSMTYATDGC QGFAPGYPLG TIEALRCQTC 60 GCHQNFRRRL ETRHPQQQVY DGTHISYSPP STIIPLPQPP PATQPDVAPA VDPAMKELNP 120 NANSSSHSLR EVVQKVKKKW MREQWKKLAS SKSLLPPVPP GPPLRVYHMR RRDIIKARIA 180 AKNNYEGGSS SKRRPCSYDY |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A314L9L8 | 9e-25 | A0A314L9L8_NICAT; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA15336 | 4 | 8 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G74660.1 | 1e-11 | mini zinc finger 1 |