PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00011g00033.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family WRKY
Protein Properties Length: 460aa    MW: 50785.1 Da    PI: 6.3281
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00011g00033.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY962.5e-30210269159
                               ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                      WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                               ++Dg++WrKYGqK  kg+++pr+YYrCt a gCpv+k+v+r+ ed +++++tYeg+Hnh+
  Peaxi162Scf00011g00033.1 210 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVApGCPVRKQVQRCLEDMSILITTYEGTHNHP 269
                               58***************************99****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.1E-32195271IPR003657WRKY domain
SuperFamilySSF1182908.63E-28203271IPR003657WRKY domain
PROSITE profilePS5081129.161205271IPR003657WRKY domain
SMARTSM007743.2E-37210270IPR003657WRKY domain
PfamPF031063.5E-27211269IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 460 aa     Download sequence    Send to blast
MENNKSESDE MEIDLSLKLD SREEEEVEPS NEENQIGESS QLSMLQMEMN KMKEENKVLR  60
KAVEQTMKDY YDLQAKFAII HRNNHEKDHT NFLSLSGNDD TSEGLTRGTK ILEINNKTSS  120
PALQEKDDTM DGELGLSLTL VSSNMSSASK VEFTEEERLK EKKEDARITQ IQNRPHGGNL  180
GGLTSHVTAA SPPNRKARVS VRARCESATM NDGCQWRKYG QKIAKGNPCP RAYYRCTVAP  240
GCPVRKQVQR CLEDMSILIT TYEGTHNHPL PVGATAMAST TSAAASFMLV DSSINPLLSN  300
GNISNFNQAV NFPYHNAPYN FANSSSSTSP YFSNSRNNLN SSEGNIVLDL TKNISNDYQR  360
QFPVVNSSNS SSPAQLGHSW MPKLPSNYEG NNTNVNNFFP GNPLPNVERN HNSGNHLAHE  420
NMSAIASDPK FRVAVAAAIS SLINKDQSHG ESSGSIRNSQ
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A1e-22197273176WRKY transcription factor 1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by potassium deprivation. {ECO:0000269|PubMed:15173595}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9754404e-49HG975440.1 Solanum pennellii chromosome ch01, complete genome.
GenBankHG9755134e-49HG975513.1 Solanum lycopersicum chromosome ch01, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009800949.10.0PREDICTED: probable WRKY transcription factor 9
RefseqXP_016484769.10.0PREDICTED: probable WRKY transcription factor 9
RefseqXP_019265826.10.0PREDICTED: probable WRKY transcription factor 9
SwissprotQ9C9F02e-79WRKY9_ARATH; Probable WRKY transcription factor 9
TrEMBLA0A1S4B7C70.0A0A1S4B7C7_TOBAC; probable WRKY transcription factor 9
TrEMBLA0A1U7YNY30.0A0A1U7YNY3_NICSY; probable WRKY transcription factor 9
TrEMBLA0A314L2M80.0A0A314L2M8_NICAT; Putative wrky transcription factor 9
STRINGXP_009800949.10.0(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA72872129
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68150.12e-74WRKY DNA-binding protein 9