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Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Peaxi162Scf00010g00077.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
|
| Family |
SRS |
| Protein Properties |
Length: 294aa MW: 32494.6 Da PI: 6.7817 |
| Description |
SRS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Peaxi162Scf00010g00077.1 | genome | SGN | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF702 | 181.8 | 2.9e-56 | 86 | 218 | 2 | 153 |
DUF702 2 rsgtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasaaeaaskrkrelkskkqsal 86
+sg++sC+dCGnqakkdC+++RCRtCCksrgf+C+thvkstWv+aakrrerqqq++++s+ +++r++
Peaxi162Scf00010g00077.1 86 TSGGISCEDCGNQAKKDCQYMRCRTCCKSRGFQCTTHVKSTWVSAAKRRERQQQQTSSSEL----------EEHRDH-------- 152
57899**********************************************9998876332..........333332........ PP
DUF702 87 sstklssaeskkeletsslPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGle 153
+ k ++ ++++ le+ ++P+++ss+avf+cvr+ss+d++++++aYqtavsigGh+fkGiLy+qG
Peaxi162Scf00010g00077.1 153 -NLKRQKDDPNSGLEVGNFPAKLSSSAVFQCVRMSSIDENDDQVAYQTAVSIGGHIFKGILYNQGHG 218
.11122344566788999***********************************************75 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 294 aa
Download sequence Send
to blast |
MAGFFSLEGR ETRQEQHHQE STNQQIINQE SNWFLYRNND QELPTYKGFE LWQPNPINQL 60
QDLYPTSLDH GLSSRSANFT IIRSSTSGGI SCEDCGNQAK KDCQYMRCRT CCKSRGFQCT 120
THVKSTWVSA AKRRERQQQQ TSSSELEEHR DHNLKRQKDD PNSGLEVGNF PAKLSSSAVF 180
QCVRMSSIDE NDDQVAYQTA VSIGGHIFKG ILYNQGHGSQ YNITTAGDTS SSGGEPLSHQ 240
HNVIGTATSA AANVAGSGSA AVVEGSNLFD PSLYPVATHH TFMAGTQFFT PPRS
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription activator involved in the transcriptional regulation of terpene biosynthesis in glandular trichomes (PubMed:24884371, PubMed:24142382). Binds to the promoter of the linalool synthase TPS5 and promotes TPS5 gene transactivation (PubMed:24884371, PubMed:24142382). Acts synergistically with MYC1 in the transactivation of TPS5 (PubMed:24884371). {ECO:0000269|PubMed:24142382, ECO:0000269|PubMed:24884371}. |
| Best hit in Arabidopsis thaliana ? help
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| Hit ID |
E-value |
Description |
| AT5G66350.1 | 4e-54 | Lateral root primordium (LRP) protein-related |
