PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00008g00815.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family bHLH
Protein Properties Length: 214aa    MW: 24722.8 Da    PI: 9.009
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00008g00815.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH192.6e-061642631
                              HHHHHHHHHHHHHHHHHHHCTSCC.C. CS
                       HLH  6 nerErrRRdriNsafeeLrellPk.as 31
                              + +E++RR++++  f++L +llP+ a+
  Peaxi162Scf00008g00815.1 16 KYVEKNRRNKMKALFNQLYSLLPPhAV 42
                              568********************9665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS508889.3621083IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474594.97E-813101IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.1E-814101IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 214 aa     Download sequence    Send to blast
MYSGQVDNYA PKLERKYVEK NRRNKMKALF NQLYSLLPPH AVQPETVGSN ELITSNMLVS  60
IKLQEAMALP DQIDAAVNYL KNLEMKLEKR KVHLEELRRS KKRTYSCMEN QNPSTATKLF  120
PQIEVHEMSP TMDIILITGL GNVAMFYNII RLLHEEAFEV INANFSLYGN SVLQIYHETK  180
VSICYFKLYA HIYGIKQCAK HQCSLLAVIT NNLY
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
197103RRSKKRT
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016541250.17e-71PREDICTED: uncharacterized protein LOC107841915
TrEMBLA0A1U8ED512e-69A0A1U8ED51_CAPAN; uncharacterized protein LOC107841915
STRINGXP_009591015.15e-57(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA52971427
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20970.11e-20bHLH family protein