|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Peaxi162Scf00003g04743.1 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
|
Family |
ERF |
Protein Properties |
Length: 251aa MW: 28519.2 Da PI: 6.5532 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Peaxi162Scf00003g04743.1 | genome | SGN | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 44.5 | 3.7e-14 | 94 | 143 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
++ GVr+++ + +W AeI+d ++ + r +lg+f +ae+ a+a+++a+ l+g
Peaxi162Scf00003g04743.1 94 KFVGVRQRP-SEKWIAEIKDTTK---NIRMWLGTFESAEDVARAYDQAACLLRG 143
799******.7*********443...5**********************99987 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 251 aa
Download sequence Send
to blast |
MGQMANTTGR IPPWIISTIT GILRILEFGM KRDYIVLLLA IDGLNANRTD GRYAEISSAS 60 PAEMSLLMRK LQLKHLRFQE SGNNTSSSSS SSNKFVGVRQ RPSEKWIAEI KDTTKNIRMW 120 LGTFESAEDV ARAYDQAACL LRGSNTRTNF VTRVSADSPL AYRIKNQEKC KTDQTKEHNF 180 DQGLEFAQQL SNFPKNVTLD ESKDDMGFTE FERMKVERQI SASLYAVNGV QEYMENVYDP 240 SESLWDLPTL F
|
Functional Description ? help
Back to Top |
Source |
Description |
UniProt | Transcription factor involved in symbiotic nodule signaling in response to rhizobial Nod factors (NFs) (PubMed:17449807, PubMed:17827349). Binds to the GCC-box (NF-responsive box) of ENOD11 promoter. Acts as transcriptional activator of NF-responsive box-containing target gene promoters in root hairs (PubMed:17827349). Functions as a transcriptional regulator required for root infection by symbiotic rhizobia, infection thread (IT) formation and maintenance, and nodule development. Necessary for NF-induced gene expression and spontaneous nodulation activated by CCAMK. Functions downstream of CCAMK to activate nodulation gene expression (PubMed:17449807). Involved in early stages of root nodule development. Functions redundantly with ERN2. Is essential with ERN2 for the initiation of root hair infection, and nodule organogenesis and development. Required for accurate expression of the NF signaling genes ENOD11 and ENOD12 (PubMed:23077241, PubMed:27208242). {ECO:0000269|PubMed:17449807, ECO:0000269|PubMed:17827349, ECO:0000269|PubMed:23077241, ECO:0000269|PubMed:27208242}. |
Regulation -- Description ? help
Back to Top |
Source |
Description |
UniProt | INDUCTION: Induced in roots from 1 to 21 day after inoculation with Sinorhizobium meliloti (PubMed:17449807). Induced by Nod factors in root hairs (PubMed:17827349). {ECO:0000269|PubMed:17449807, ECO:0000269|PubMed:17827349}. |
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | AC237875 | 8e-71 | AC237875.1 Solanum tuberosum cultivar RH89-039-16 clone RH168B16, complete sequence. |