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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Peaxi162Scf00003g00077.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
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| Family |
SRS |
| Protein Properties |
Length: 198aa MW: 22316.9 Da PI: 8.7507 |
| Description |
SRS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Peaxi162Scf00003g00077.1 | genome | SGN | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF702 | 174.5 | 5e-54 | 10 | 149 | 4 | 154 |
DUF702 4 gtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasaaeaaskrkrelkskkqsalss 88
t++CqdCGnqakkdC + RCRtCCksrg +C+th kstW+p+++rr r+ +++++ ++ +++++++ +++++ +
Peaxi162Scf00003g00077.1 10 STSRCQDCGNQAKKDCPYLRCRTCCKSRGNQCQTHEKSTWIPVSRRRPRHLLHQQQQLSTIQQQNQQQLQNPKRY--------RE 86
5789********************************************965555544444333333333333332........22 PP
DUF702 89 tklssaeskkeletsslPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGlee 154
++ s +++lP+evs +avfrcvrvssvd+ +++aYqt+v+igGhvfkGiLyd G++e
Peaxi162Scf00003g00077.1 87 N---ENPSAVLGGQEDLPAEVSLPAVFRCVRVSSVDNVVDQYAYQTSVNIGGHVFKGILYDLGPAE 149
2...222223345677***********************************************986 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 198 aa
Download sequence Send
to blast |
MMREEGSSLS TSRCQDCGNQ AKKDCPYLRC RTCCKSRGNQ CQTHEKSTWI PVSRRRPRHL 60
LHQQQQLSTI QQQNQQQLQN PKRYRENENP SAVLGGQEDL PAEVSLPAVF RCVRVSSVDN 120
VVDQYAYQTS VNIGGHVFKG ILYDLGPAES HHNNMAKEST SSGGFHQQLT TNLTPPSYPS 180
SFNPFMPGTQ FFQLPKSS
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| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription activator that binds DNA on 5'-ACTCTAC-3' and promotes auxin homeostasis-regulating gene expression (e.g. YUC genes), as well as genes affecting stamen development, cell expansion and timing of flowering. Synergistically with other SHI-related proteins, regulates gynoecium, stamen and leaf development in a dose-dependent manner, controlling apical-basal patterning. Promotes style and stigma formation, and influences vascular development during gynoecium development. May also have a role in the formation and/or maintenance of the shoot apical meristem (SAM). {ECO:0000269|PubMed:16740146}. |
