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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Peaxi162Scf00001g00352.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
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Family |
ERF |
Protein Properties |
Length: 252aa MW: 28635.8 Da PI: 6.9389 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Peaxi162Scf00001g00352.1 | genome | SGN | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 60.4 | 4.3e-19 | 75 | 123 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
y+G+r+++ +g+W+AeIrdp++ r++lg+f taeeAa+a++ ++k++g
Peaxi162Scf00001g00352.1 75 YRGIRQRP-WGKWAAEIRDPRK---GVRVWLGTFNTAEEAARAYDSEARKIRG 123
9*******.**********954...4************************998 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0034059 | Biological Process | response to anoxia |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 252 aa
Download sequence Send
to blast |
MCGGAIIADL IPRRDRRASS TDLWPTSADF WPNASFSKPN TSSLSTQKVP VTPKRAQPTT 60 EQIEKSKKRQ RKNLYRGIRQ RPWGKWAAEI RDPRKGVRVW LGTFNTAEEA ARAYDSEARK 120 IRGKKAKVNF PNEDNHYSTH PQPQRNIGYD SYDTCYNSHE VNNSYGIIEN TEPVNNDQNC 180 QLKEQEKEEN EVEKLSEELM AYESLMKFYE IPYVDGQSVA ATMNPTAEAM GGGSMDLWSF 240 DDVSPPVSPA HL
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | HQ259598 | 0.0 | HQ259598.1 Petunia x hybrida ethylene-responsive-element-binding factor 4 mRNA, complete cds. |