PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr041197.1
Organism
Pyrus bretschneideri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family NAC
Protein Properties Length: 311aa    MW: 36872 Da    PI: 8.9737
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr041197.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM56.78.5e-1881453128
          NAM   3 pGfrFhPtdeelvveyLkkkvegkk...leleevikevdiy.kvePwdLpk...kvkaeekewyfFskrdkkyatgkrknr.atksgyWkatgkdkev 92 
                  +Gf F+P d+el++++L +kv  ++    +   +++e+d++ +++Pw++       +   k+ yfF+k +k +++g r  r  +++g+W+ +  +++v
  Pbr041197.1   8 VGFWFKPADQELINFFLYRKVVLRQplvPRHVGFVHEIDLLgDHQPWEIWDacgGPQPYGKQAYFFCKLKKLSKSGVRIDRrNASEGFWNGKQLSEDV 105
                  69******************88888675333356****9762689****74233223356799***************9987899*****99999999 PP

          NAM  93 lsk......kgelvglkktLvfykgrapkgektdWvmheyrl 128
                  +++      ++  +g k+ + + ++  +  ++ dW ++ y l
  Pbr041197.1 106 FVHhdvnpnNKWIIGRKRQFKYVNEGLE--NHHDWYLETYIL 145
                  9975565544445*********954444..489****99976 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100522.0996164IPR003441NAC domain
PfamPF023657.4E-128144IPR003441NAC domain
SuperFamilySSF1019411.44E-178162IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 311 aa     Download sequence    Send to blast
MADYDDDVGF WFKPADQELI NFFLYRKVVL RQPLVPRHVG FVHEIDLLGD HQPWEIWDAC  60
GGPQPYGKQA YFFCKLKKLS KSGVRIDRRN ASEGFWNGKQ LSEDVFVHHD VNPNNKWIIG  120
RKRQFKYVNE GLENHHDWYL ETYILASIPD DDQAVVAICR LRKNYHKRKR YAPQRNRRRI  180
NGRKERHGRR INGQLMETKR QSCSSNFTTD EKLNIIDDVA TMGCDQCDYI NYASGYDHYG  240
ATSCNWKEYF IHGLRELPVD VNVDEYLMRS LDAENQMPPQ LRLRWLNIIV KTKRRRWPCQ  300
LLGWIMVIMD *
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr041197.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A498K2Y16e-49A0A498K2Y1_MALDO; Uncharacterized protein (Fragment)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12910.11e-11NAC family protein