PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Gene Ontology |

Cis-element |

Orthologous Group |

Basic Information? help Back to Top

TF ID

Pbr040816.1

Organism

Pyrus bretschneideri

Taxonomic ID

225117

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus

Family

G2-like

Protein Properties

Length: 223aa MW: 25585.5 Da PI: 9.4471

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pbr040816.1	genome	CPETR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	38.8	2e-12	13	38	1	26
G2-like 1 kprlrWtpeLHerFveaveqLGGsek 26 k+rlrWt+eLH+rFveav++LGG+++ Pbr040816.1 13 KERLRWTQELHDRFVEAVTKLGGPDR 38 68**********************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	7.6E-10	12	38	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	2.9E-8	13	38	IPR006447	Myb domain, plants
Pfam	PF14379	1.2E-7	92	122	IPR025756	MYB-CC type transcription factor, LHEQLE-containing domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 223 aa Download sequence Send to blast
MGSSRSASSG ANKERLRWTQ ELHDRFVEAV TKLGGPDRYL EGHERLWTDR LPQQKPFAGL 60 FSFPLSRPXX XXPVLRYDQS TESQSSFQSR LVIQVNRRLS DQHEVQKSLK QKFEAQGRFL 120 ERYSAERHNT NKNRPILITK PKKAPLSQTS LPSLCDDSES NAKDFASDSE PGRSETQSSA 180 EQFQALKKKL RLHHHQNDHN VQLALNSEFC YIPHEDDHIS FP*

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Pbr040816.1

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_008370148.1	7e-87	myb family transcription factor PHL7-like
TrEMBL	A0A498IIE2	1e-100	A0A498IIE2_MALDO; Uncharacterized protein
STRING	XP_008370148.1	3e-86	(Malus domestica)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF10659	25	35

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G01060.1	1e-14	G2-like family protein