PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr039294.1
Organism
Pyrus bretschneideri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family EIL
Protein Properties Length: 435aa    MW: 49082.3 Da    PI: 5.776
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr039294.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3389.64.5e-119303361298
                  XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
         EIN3   1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLraWWkek 98 
                  +elkkrmwkd ++l++lke++k   ++++++ + ++s+  +e + rkkm+raQD+iLkYM+k+mevc+a+GfvYgi+pekgkpv+g+sdsLr+WWk+k
  Pbr039294.1  30 DELKKRMWKDSIRLQKLKENRKIIEAEEDEEEEPAESSAKQEGSHRKKMARAQDSILKYMVKIMEVCKAKGFVYGIVPEKGKPVTGSSDSLREWWKDK 127
                  79******************998655555568888999************************************************************ PP

                  XXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHHHHT--TT--.---- CS
         EIN3  99 vefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwgelglskdqgtppyk 196
                   +fd n+p+ai++y    li++ges+      s+ h l+elqDTtlgSLLsal+qhc+ppqrrfplekg++pPWWPtGke wwg +gls ++g+ppy+
  Pbr039294.1 128 ARFDHNAPIAIAEY-LPALIFEGESDH----GSYAHLLHELQDTTLGSLLSALIQHCMPPQRRFPLEKGLAPPWWPTGKEMWWGDQGLSVEHGAPPYR 220
                  **************.678999988877....89***************************************************************** PP

                  -GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXX...XX.XXXXXXXXXXXXXXXXXXXX..... CS
         EIN3 197 kphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsah...ss.slrkqspkvtlsceqkedve..... 285
                  kphdlkkawkvs L+av+khm+p+++++r+l+ qsk+lqdkm+ake++++++v+nqee++++        s  s rk  ++++    ++++++     
  Pbr039294.1 221 KPHDLKKAWKVSALAAVVKHMAPHSDRVRRLVTQSKCLQDKMTAKETAIWSKVVNQEESLIQLTEKClkiSDhSNRK-GKNLKWPATTSNEKRkmmsi 317
                  **********************************************************9885444443332233333.33333333322222223455 PP

                  ......XXXXXX.XXXXXX CS
         EIN3 286 ......gkkeskikhvqav 298
                        ++k+s+    q +
  Pbr039294.1 318 dlglgfVEKKSRADYDQGQ 336
                  5555544444443333333 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048732.6E-11730278No hitNo description
Gene3DG3DSA:1.10.3180.104.3E-66153283IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167689.42E-58157281IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 435 aa     Download sequence    Send to blast
MVKFHVQVDP LSLGVVAEDE EAAEDHITYD ELKKRMWKDS IRLQKLKENR KIIEAEEDEE  60
EEPAESSAKQ EGSHRKKMAR AQDSILKYMV KIMEVCKAKG FVYGIVPEKG KPVTGSSDSL  120
REWWKDKARF DHNAPIAIAE YLPALIFEGE SDHGSYAHLL HELQDTTLGS LLSALIQHCM  180
PPQRRFPLEK GLAPPWWPTG KEMWWGDQGL SVEHGAPPYR KPHDLKKAWK VSALAAVVKH  240
MAPHSDRVRR LVTQSKCLQD KMTAKETAIW SKVVNQEESL IQLTEKCLKI SDHSNRKGKN  300
LKWPATTSNE KRKMMSIDLG LGFVEKKSRA DYDQGQDQDQ TLCASDQNSG AVSVVDWINM  360
EIEKANRIDD NSGTKVADGY GSASYWAGGI DDDDLAMDGA LEIQRGNKEI NRSSEDMSHN  420
YDQDSTSIWD LGYD*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4zds_A2e-581552801126Protein ETHYLENE INSENSITIVE 3
4zds_B2e-581552801126Protein ETHYLENE INSENSITIVE 3
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtPutative transcription factor that may be involved in the ethylene response pathway. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr039294.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009345481.10.0PREDICTED: putative ETHYLENE INSENSITIVE 3-like 4 protein
SwissprotQ9LX161e-119EIL4_ARATH; Putative ETHYLENE INSENSITIVE 3-like 4 protein
TrEMBLA0A498KMG60.0A0A498KMG6_MALDO; Uncharacterized protein
STRINGXP_009345481.10.0(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF32234200
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G10120.11e-120EIL family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Jeong HJ,Choi JY,Shin HY,Bae JM,Shin JS
    Seed-specific expression of seven Arabidopsis promoters.
    Gene, 2014. 553(1): p. 17-23
    [PMID:25261846]