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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Pbr039143.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
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Family |
HD-ZIP |
Protein Properties |
Length: 335aa MW: 37660.3 Da PI: 4.3632 |
Description |
HD-ZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Pbr039143.1 | genome | CPETR | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Homeobox | 59 | 7.9e-19 | 90 | 144 | 3 | 57 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS
Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57
k++++t++q++ Le+ Fe+++++ e++ +LAk+lgL+ rqV +WFqNrR ++k+
Pbr039143.1 90 KKRRLTANQVQFLEKNFESENKLEPERKVQLAKELGLQPRQVAIWFQNRRVRYKN 144
56689************************************************95 PP
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2 | HD-ZIP_I/II | 126.4 | 1.3e-40 | 90 | 180 | 2 | 92 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92
kkrrl+++qv++LE++Fe+e+kLeperKv+la+eLglqprqva+WFqnrR R+k+kqlEkdy++Lk++yd+lk + ++L ke+e+L++e++
Pbr039143.1 90 KKRRLTANQVQFLEKNFESENKLEPERKVQLAKELGLQPRQVAIWFQNRRVRYKNKQLEKDYDSLKASYDKLKVDADNLLKENESLKNEID 180
9**************************************************************************************9986 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 335 aa
Download sequence Send
to blast |
MASGKLYGSS SSSSSADMKV TFRNEKRPRS SDALESLWIP NPSSSFYGSN SMVNFENVSG 60 GDSLDMSFFQ PKEENEDEDY DGSYLHQPGK KRRLTANQVQ FLEKNFESEN KLEPERKVQL 120 AKELGLQPRQ VAIWFQNRRV RYKNKQLEKD YDSLKASYDK LKVDADNLLK ENESLKNEID 180 SIKDILLSRE KGNPGKGDSD SQDAINTSDL EPRNTILNAG SENVTKVAMV LCKQEDASSA 240 KSDVFDSDSP HCTENHSSLL EPADSSHVFE PADQSDFSQD EDDDLGKTLL PPPPPQLLKL 300 EDCCYDYITP PSSSNFGYIP LDDQDQQPFC FWPY*
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Nucleic Localization
Signal ? help
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 |
No. |
Start |
End |
Sequence |
1 | 137 | 145 | RRVRYKNKQ |