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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Pbr039075.1 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
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| Family |
MYB |
| Protein Properties |
Length: 474aa MW: 52184.1 Da PI: 8.7962 |
| Description |
MYB family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Pbr039075.1 | genome | CPETR | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Myb_DNA-binding | 51 | 3.3e-16 | 130 | 175 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
rg W + Ed +l+++v+++G+ +W++Ia+++ gR++k+c++rw++
Pbr039075.1 130 RGHWRPAEDSKLKELVALYGPQNWNLIAEKLE-GRSGKSCRLRWFNQ 175
899*****************************.***********996 PP
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| 2 | Myb_DNA-binding | 52.1 | 1.5e-16 | 182 | 225 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
r ++T+eE+e+l + ++ +G++ W+ Iar ++ gRt++ +k++w+
Pbr039075.1 182 RRAFTEEEEERLMQTHRIYGNK-WAMIARLFP-GRTDNAVKNHWHV 225
678*******************.*********.***********96 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0010199 | Biological Process | organ boundary specification between lateral organs and the meristem |
| GO:0003677 | Molecular Function | DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 474 aa
Download sequence Send
to blast |
MMANNGAIYV TETPNTLSRF SSSSSSSSSS SSSMGMVYAD MGSLSLSSKY GVYSSVSSQD 60
SSHISKISES ENGRAFWGFP STRSYEDHHN SSDMKGSDYT SSDHDKNPNE SGVKVSEKET 120
ESGQSKLCAR GHWRPAEDSK LKELVALYGP QNWNLIAEKL EGRSGKSCRL RWFNQLDPRI 180
NRRAFTEEEE ERLMQTHRIY GNKWAMIARL FPGRTDNAVK NHWHVIMARK YREQSSAYRR 240
RKLNQTVYRS MEENPSFNAA SSTEPPPPYG GLSLPNGGLG GSGSISSFSY GTSYDGIVGY 300
GADYYGSNGS QNLISVEEEA ITRKKLLSHN NSGFCSQQKT PFEFFRGPKS NEVMGMMSQN 360
RCWDGSGEME GHSYGGMYTH HPPPNMNVTT MQQSNFHSLV HQKYSDSSCQ VSGGEPSPSA 420
SAADRVVGGG GGGGGHPXXX XXXXXXXXXX XXXXXAATVR RAFRHRPSLI FLG*
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